Sam_g26323


Description : not classified & original description: none


Gene families : OG0000000 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26323

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00010p00217860 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00062420 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At3g20730... 0.03 OrthoFinder output from all 47 species
AMTR_s00029p00248070 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At2g33680... 0.02 OrthoFinder output from all 47 species
AMTR_s00111p00107400 evm_27.TU.AmTr_v1... Pentatricopeptide repeat-containing protein At4g21065... 0.03 OrthoFinder output from all 47 species
Adi_g004512 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013193 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g013556 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g035661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g074661 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g079910 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g101108 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g113540 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g44555 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g17249 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06739 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g06803 OTP86 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g16416 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g21031 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g22752 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30496 OSB1 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30697 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g30812 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g31230 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g40168 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g47260 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aob_g23626 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g36436 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene02341.t1 Aspi01Gene02341 ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene02996.t1 CRR2, Aspi01Gene02996 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene13980.t1 Aspi01Gene13980 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene25448.t1 Aspi01Gene25448 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene38958.t1 Aspi01Gene38958 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene41675.t1 CRR2, Aspi01Gene41675 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene45795.t1 Aspi01Gene45795 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene49895.t1 CRR22, Aspi01Gene49895 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene66850.t1 Aspi01Gene66850 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0006.g010527 No alias not classified & original description: CDS=1-2745 0.03 OrthoFinder output from all 47 species
Azfi_s0081.g038550 EMB2758 not classified & original description: CDS=1-1851 0.03 OrthoFinder output from all 47 species
Cba_g07194 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g07200 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g20506 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g21419 EMB2744 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g26306 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g32456 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g34918 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g35141 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37951 EMB2758 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g60651 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g67212 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.28G037300.1 Ceric.28G037300 not classified & original description: pacid=50570602... 0.03 OrthoFinder output from all 47 species
Ceric.29G048500.1 Ceric.29G048500 not classified & original description: pacid=50625078... 0.03 OrthoFinder output from all 47 species
Dcu_g07600 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08459 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08493 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g08536 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g11166 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g26473 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36357 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g36987 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40796 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g40949 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g43978 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g44864 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g45907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46630 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g46754 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g47892 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g50014 No alias ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g07340 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g09099 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dde_g13082 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g16378 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18823 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g22176 VAC1, ECB2, ATECB2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g24430 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g50096 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os01g15530.1 LOC_Os01g15530 Pentatricopeptide repeat-containing protein At5g56310... 0.02 OrthoFinder output from all 47 species
LOC_Os10g39460.2 LOC_Os10g39460 Putative pentatricopeptide repeat-containing protein... 0.02 OrthoFinder output from all 47 species
Len_g03881 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g04697 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Len_g17743 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_184088g0010 No alias Pentatricopeptide repeat-containing protein At3g09040,... 0.03 OrthoFinder output from all 47 species
MA_7907g0020 OTP84 Pentatricopeptide repeat-containing protein At3g57430,... 0.03 OrthoFinder output from all 47 species
Mp5g04990.1 PTAC9, OSB2 ssDNA-binding protein (OSB). TAC9 cofactor of... 0.02 OrthoFinder output from all 47 species
Mp8g01790.1 No alias ssDNA-binding protein (OSB) 0.03 OrthoFinder output from all 47 species
Nbi_g10308 EMB2261 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g16471 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24053 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g24808 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g25933 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02564 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g02824 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g02850 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12185 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g12968 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g12989 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g13538 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g35599 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g49137 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g60920 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g62128 OTP86 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g63905 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g04430 CRR22 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pnu_g22129 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05289 VAC1, ECB2, ATECB2 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ppi_g05784 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g18659 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g29940 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g21956 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g27934 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g29900 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g36339 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g40203 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g49086 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Solyc04g051480.1.1 OTP84, Solyc04g051480 Pentatricopeptide repeat-containing protein At4g13650... 0.03 OrthoFinder output from all 47 species
Spa_g54669 MEF9 ssDNA-binding protein *(OSB) & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g06120 No alias ssDNA-binding protein *(OSB) & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g17469 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g17792 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46155 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0016746 acyltransferase activity IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 123 171
IPR002885 Pentatricopeptide_repeat 21 68
IPR002885 Pentatricopeptide_repeat 98 120
No external refs found!