Sam_g26311


Description : regulatory protein *(SHOU4) involved in cellulose synthase trafficking & original description: none


Gene families : OG0000929 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000929_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26311

Target Alias Description ECC score Gene Family Method Actions
AT4G22290 No alias Ubiquitin-specific protease family C19-related protein 0.02 OrthoFinder output from all 47 species
Adi_g085237 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g107802 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Als_g49969 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aob_g01916 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aop_g03201 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aop_g14554 No alias regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aspi01Gene21856.t1 Aspi01Gene21856 regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Aspi01Gene33794.t1 Aspi01Gene33794 regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Aspi01Gene41534.t1 Aspi01Gene41534 regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Aspi01Gene64060.t1 Aspi01Gene64060 regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Azfi_s0073.g037099 No alias not classified & original description: CDS=1146-2774 0.03 OrthoFinder output from all 47 species
Cba_g05871 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ceric.12G073600.1 Ceric.12G073600 regulatory protein *(SHOU4) involved in cellulose... 0.04 OrthoFinder output from all 47 species
Ceric.18G001900.1 Ceric.18G001900 regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Ceric.21G069000.1 Ceric.21G069000 not classified & original description: pacid=50602627... 0.02 OrthoFinder output from all 47 species
Dcu_g26820 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Dde_g10281 No alias regulatory protein *(SHOU4) involved in cellulose... 0.05 OrthoFinder output from all 47 species
LOC_Os08g13350.1 LOC_Os08g13350 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Len_g04751 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Lfl_g06128 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Lfl_g15628 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
MA_9168g0010 No alias SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species
Msp_g11445 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g02160 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Nbi_g05342 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Ore_g16050 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0018.g007411 No alias not classified & original description: CDS=1388-3022 0.04 OrthoFinder output from all 47 species
Spa_g18006 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Tin_g01046 No alias regulatory protein *(SHOU4) involved in cellulose... 0.02 OrthoFinder output from all 47 species
Tin_g25164 No alias regulatory protein *(SHOU4) involved in cellulose... 0.03 OrthoFinder output from all 47 species
Zm00001e041596_P001 Zm00001e041596 SHOU4-type cellulose synthase CSC-interactive protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
CC GO:0000148 1,3-beta-D-glucan synthase complex IEP HCCA
BP GO:0000271 polysaccharide biosynthetic process IEP HCCA
MF GO:0003843 1,3-beta-D-glucan synthase activity IEP HCCA
MF GO:0005507 copper ion binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0005976 polysaccharide metabolic process IEP HCCA
BP GO:0006073 cellular glucan metabolic process IEP HCCA
BP GO:0006074 (1->3)-beta-D-glucan metabolic process IEP HCCA
BP GO:0006075 (1->3)-beta-D-glucan biosynthetic process IEP HCCA
MF GO:0008131 primary amine oxidase activity IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
BP GO:0009250 glucan biosynthetic process IEP HCCA
BP GO:0009308 amine metabolic process IEP HCCA
CC GO:0016020 membrane IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP HCCA
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
BP GO:0033692 cellular polysaccharide biosynthetic process IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
MF GO:0035251 UDP-glucosyltransferase activity IEP HCCA
BP GO:0044042 glucan metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0044264 cellular polysaccharide metabolic process IEP HCCA
MF GO:0046527 glucosyltransferase activity IEP HCCA
MF GO:0048038 quinone binding IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051273 beta-glucan metabolic process IEP HCCA
BP GO:0051274 beta-glucan biosynthetic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
CC GO:0098797 plasma membrane protein complex IEP HCCA
CC GO:1990234 transferase complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!