1. Home
  2. Species
  3. Salvinia molesta
  4. Sequence
  5. Sam_g26303

Sam_g26303


Description : scaffold component *(CKS) of cyclin-dependent kinase complex & original description: none


Gene families : OG0002701 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002701_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g26303

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00140p00038880 evm_27.TU.AmTr_v1... Cell cycle.regulation.cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Adi_g048990 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Aop_g22173 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
Aspi01Gene46878.t1 CKS1AT, CKS1,... scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Ceric.02G054300.1 CKS1AT, CKS1,... scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Ceric.20G054400.1 CKS1AT, CKS1,... scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Cre03.g180350 No alias Cell cycle.regulation.cyclin-dependent kinase... 0.01 OrthoFinder output from all 47 species
Dac_g26714 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
Dde_g23860 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.02 OrthoFinder output from all 47 species
Gb_39695 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.03 OrthoFinder output from all 47 species
LOC_Os03g05300.1 LOC_Os03g05300 scaffolding component CKS of cyclin-dependent kinase complex 0.02 OrthoFinder output from all 47 species
Len_g41049 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Lfl_g40067 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
MA_364061g0010 CKS1AT, CKS1 scaffolding component CKS of cyclin-dependent kinase complex 0.03 OrthoFinder output from all 47 species
Mp1g16700.1 No alias scaffolding component CKS of cyclin-dependent kinase complex 0.01 OrthoFinder output from all 47 species
Msp_g29168 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.03 OrthoFinder output from all 47 species
Nbi_g08553 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.04 OrthoFinder output from all 47 species
Pir_g65792 CKS2 scaffold component *(CKS) of cyclin-dependent kinase... 0.05 OrthoFinder output from all 47 species
Spa_g48395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.09 OrthoFinder output from all 47 species
Tin_g18395 CKS1AT, CKS1 scaffold component *(CKS) of cyclin-dependent kinase... 0.06 OrthoFinder output from all 47 species
Zm00001e000375_P001 CKS1AT, CKS1,... scaffolding component CKS of cyclin-dependent kinase complex 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016538 cyclin-dependent protein serine/threonine kinase regulator activity IEA Interproscan
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000049 tRNA binding IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003896 DNA primase activity IEP HCCA
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006269 DNA replication, synthesis of RNA primer IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
BP GO:0032774 RNA biosynthetic process IEP HCCA
MF GO:0034062 5'-3' RNA polymerase activity IEP HCCA
BP GO:0034641 cellular nitrogen compound metabolic process IEP HCCA
CC GO:0042575 DNA polymerase complex IEP HCCA
CC GO:0043625 delta DNA polymerase complex IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
CC GO:0061695 transferase complex, transferring phosphorus-containing groups IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097747 RNA polymerase activity IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
CC GO:0140535 intracellular protein-containing complex IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
CC GO:1990234 transferase complex IEP HCCA
InterPro domains Description Start Stop
IPR000789 Cyclin-dep_kinase_reg-sub 35 101
No external refs found!