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  5. Sam_g25884

Sam_g25884


Description : gamma-aminobutyric acid transporter *(GABP) & original description: none


Gene families : OG0000428 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000428_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25884

Target Alias Description ECC score Gene Family Method Actions
Adi_g011899 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Adi_g054847 BAT1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g19974 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Aob_g26657 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Aob_g32024 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
Aop_g08356 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Aspi01Gene70269.t1 BAT1, Aspi01Gene70269 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Ceric.11G027600.1 BAT1, Ceric.11G027600 gamma-aminobutyric acid transporter *(GABP) & original... 0.03 OrthoFinder output from all 47 species
Cre01.g023650 BAT1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Ehy_g19741 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01008812001 BAT1 Solute transport.carrier-mediated transport.APC... 0.03 OrthoFinder output from all 47 species
GSVIVT01022329001 BAT1 Solute transport.carrier-mediated transport.APC... 0.02 OrthoFinder output from all 47 species
Lfl_g08480 BAT1 gamma-aminobutyric acid transporter *(GABP) & original... 0.02 OrthoFinder output from all 47 species
MA_10426763g0010 BAT1 Amino-acid permease BAT1 homolog OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
MA_172627g0020 BAT1 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
MA_58237g0020 BAT1 Amino-acid permease BAT1 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Mp5g15510.1 BAT1 gamma-aminobutyric acid transporter (GABP) 0.03 OrthoFinder output from all 47 species
Zm00001e018674_P001 BAT1, Zm00001e018674 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species
Zm00001e018679_P001 BAT1, Zm00001e018679 gamma-aminobutyric acid transporter (GABP) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0022857 transmembrane transporter activity IEA Interproscan
BP GO:0055085 transmembrane transport IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR002293 AA/rel_permease1 52 510
No external refs found!