Sam_g25874

Description : component *(bL12m) of large mitoribosomal-subunit proteome & original description: none

Gene families : OG0000926 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000926_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g25874

Target	Alias	Description	ECC score	Gene Family Method
AT1G70190	No alias	Ribosomal protein L7/L12, oligomerisation;Ribosomal...	0.02	OrthoFinder output from all 47 species
Adi_g066066	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g079553	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g19876	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Aop_g01020	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Azfi_s0331.g065406	No alias	not classified & original description: CDS=1-612	0.03	OrthoFinder output from all 47 species
Cba_g11519	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ceric.34G065900.1	Ceric.34G065900	not classified & original description: pacid=50622739...	0.02	OrthoFinder output from all 47 species
Dac_g02148	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Dac_g05009	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Mp1g23110.1	No alias	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Msp_g06214	No alias	not classified & original description: none	0.01	OrthoFinder output from all 47 species
Ore_g10408	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Pnu_g08532	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ppi_g00755	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ppi_g59718	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Solyc09g010030.3.1	Solyc09g010030	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species
Spa_g09129	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g07332	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Tin_g23775	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Zm00001e025012_P001	Zm00001e025012	component mtRPL7/L12 of large ribosomal subunit proteome	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003735	structural constituent of ribosome	IEA	Interproscan
MF	GO:0005198	structural molecule activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005840	ribosome	IEA	Interproscan
BP	GO:0006412	translation	IEA	Interproscan
BP	GO:0006518	peptide metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
BP	GO:0043043	peptide biosynthetic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043228	non-membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043232	intracellular non-membrane-bounded organelle	None	Extended
BP	GO:0043603	amide metabolic process	None	Extended
BP	GO:0043604	amide biosynthetic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044271	cellular nitrogen compound biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended
BP	GO:1901566	organonitrogen compound biosynthetic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0005488	binding	IEP	HCCA
MF	GO:0005525	GTP binding	IEP	HCCA
BP	GO:0015074	DNA integration	IEP	HCCA
MF	GO:0016627	oxidoreductase activity, acting on the CH-CH group of donors	IEP	HCCA
MF	GO:0019001	guanyl nucleotide binding	IEP	HCCA
MF	GO:0031072	heat shock protein binding	IEP	HCCA
MF	GO:0032561	guanyl ribonucleotide binding	IEP	HCCA
MF	GO:0043167	ion binding	IEP	HCCA
MF	GO:0043169	cation binding	IEP	HCCA
MF	GO:0046872	metal ion binding	IEP	HCCA
MF	GO:0051082	unfolded protein binding	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR013823	Ribosomal_L7/L12_C	166	232
IPR008932	Ribosomal_L7/L12_oligo	100	146

External Links

No external refs found!

Sam_g25874

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation