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  5. Sam_g25747

Sam_g25747


Description : not classified & original description: none


Gene families : OG0000273 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000273_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25747

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00025p00161520 evm_27.TU.AmTr_v1... Vesicle trafficking.clathrin coated vesicle (CCV)... 0.01 OrthoFinder output from all 47 species
AT2G25430 No alias epsin N-terminal homology (ENTH) domain-containing... 0.02 OrthoFinder output from all 47 species
AT4G25940 No alias ENTH/ANTH/VHS superfamily protein 0.03 OrthoFinder output from all 47 species
Adi_g055261 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g104480 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g07293 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g23962 No alias accessory protein *(PlCALM3) & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g04384 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene08995.t1 Aspi01Gene08995 accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0116.g046406 No alias not classified & original description: CDS=416-2011 0.03 OrthoFinder output from all 47 species
Cba_g70257 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.04G099900.1 Ceric.04G099900 not classified & original description: pacid=50631667... 0.02 OrthoFinder output from all 47 species
Ceric.06G031300.1 Ceric.06G031300 not classified & original description: pacid=50619961... 0.06 OrthoFinder output from all 47 species
Ceric.34G007000.1 Ceric.34G007000 not classified & original description: pacid=50623589... 0.03 OrthoFinder output from all 47 species
Cre09.g393136 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.02 OrthoFinder output from all 47 species
Dac_g10551 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dac_g43641 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g05324 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01015603001 No alias Vesicle trafficking.clathrin coated vesicle (CCV)... 0.04 OrthoFinder output from all 47 species
Gb_24032 No alias ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os01g50010.1 LOC_Os01g50010 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
LOC_Os02g55970.1 LOC_Os02g55970 Putative clathrin assembly protein At5g35200... 0.03 OrthoFinder output from all 47 species
LOC_Os03g16800.1 LOC_Os03g16800 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.03 OrthoFinder output from all 47 species
LOC_Os05g02140.1 LOC_Os05g02140 ECA1/2 clathrin coated vesicle adaptor protein 0.03 OrthoFinder output from all 47 species
LOC_Os06g48630.1 LOC_Os06g48630 ECA1/2 clathrin coated vesicle adaptor protein 0.01 OrthoFinder output from all 47 species
Mp3g16270.1 No alias Putative clathrin assembly protein At2g25430... 0.02 OrthoFinder output from all 47 species
Msp_g44471 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g09477 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g11926 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g22311 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g16774 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0115.g020948 No alias not classified & original description: CDS=2516-4330 0.03 OrthoFinder output from all 47 species
Sam_g07860 No alias accessory protein *(PlCALM3) & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g07861 No alias accessory protein *(PlCALM3) & original description: none 0.04 OrthoFinder output from all 47 species
Solyc07g007820.3.1 Solyc07g007820 Putative clathrin assembly protein At5g35200... 0.05 OrthoFinder output from all 47 species
Tin_g07524 No alias accessory protein *(PlCALM3) & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e001222_P002 Zm00001e001222 component CAP1/ECA4 of TPLATE AP-2 co-adaptor complex 0.01 OrthoFinder output from all 47 species
Zm00001e027027_P002 Zm00001e027027 ECA1/2 clathrin coated vesicle adaptor protein 0.02 OrthoFinder output from all 47 species
Zm00001e028613_P001 Zm00001e028613 Putative clathrin assembly protein At1g03050... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005543 phospholipid binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0009889 regulation of biosynthetic process IEP HCCA
BP GO:0010468 regulation of gene expression IEP HCCA
BP GO:0010556 regulation of macromolecule biosynthetic process IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0019222 regulation of metabolic process IEP HCCA
BP GO:0031323 regulation of cellular metabolic process IEP HCCA
BP GO:0031326 regulation of cellular biosynthetic process IEP HCCA
BP GO:0050789 regulation of biological process IEP HCCA
BP GO:0050794 regulation of cellular process IEP HCCA
BP GO:0051171 regulation of nitrogen compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:0060255 regulation of macromolecule metabolic process IEP HCCA
BP GO:0065007 biological regulation IEP HCCA
BP GO:0080090 regulation of primary metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR011417 ANTH_dom 34 331
No external refs found!