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  5. Sam_g25625

Sam_g25625


Description : not classified & original description: none


Gene families : OG0001733 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001733_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25625

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00138200 evm_27.TU.AmTr_v1... Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.03 OrthoFinder output from all 47 species
AT1G60060 No alias Serine/threonine-protein kinase WNK (With No Lysine)-related 0.04 OrthoFinder output from all 47 species
Adi_g045681 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g21086 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g05963 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g09828 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Als_g50633 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aop_g10450 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12381 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g39258 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene34106.t1 Aspi01Gene34106 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene40284.t1 Aspi01Gene40284 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene51520.t1 Aspi01Gene51520 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0019.g015235 No alias not classified & original description: CDS=201-1475 0.07 OrthoFinder output from all 47 species
Azfi_s0413.g068586 No alias not classified & original description: CDS=761-2020 0.04 OrthoFinder output from all 47 species
Cba_g05785 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06331 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ceric.31G047700.1 Ceric.31G047700 not classified & original description: pacid=50574676... 0.03 OrthoFinder output from all 47 species
Dac_g01426 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Dac_g04257 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g08182 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g23707 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Dac_g43448 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Ehy_g05615 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ehy_g06711 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ehy_g11095 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01009438001 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp. japonica 0.02 OrthoFinder output from all 47 species
Gb_06730 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.03 OrthoFinder output from all 47 species
Gb_23490 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
Len_g07737 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Lfl_g07918 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_115450g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.02 OrthoFinder output from all 47 species
MA_394035g0010 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.04 OrthoFinder output from all 47 species
Mp7g16430.1 No alias Protein RICE SALT SENSITIVE 3 OS=Oryza sativa subsp.... 0.01 OrthoFinder output from all 47 species
Nbi_g04282 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g23743 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Nbi_g25320 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g24188 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g16255 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g32192 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g63857 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0005.g002893 No alias not classified & original description: CDS=719-2329 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010698 No alias not classified & original description: CDS=200-1438 0.05 OrthoFinder output from all 47 species
Spa_g05022 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g09211 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e036084_P002 Zm00001e036084 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA
InterPro domains Description Start Stop
IPR025610 MYC/MYB_N 17 220
No external refs found!