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  5. Sam_g25614

Sam_g25614


Description : fucosyl transferase (ESMD) involved in pectin-dependent cell adhesion & original description: none


Gene families : OG0002012 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002012_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25614
Cluster HCCA: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00017p00201590 evm_27.TU.AmTr_v1... O-fucosyltransferase 11 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00134p00086190 evm_27.TU.AmTr_v1... O-fucosyltransferase 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Aev_g27798 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Als_g56371 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
Ehy_g07822 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.02 OrthoFinder output from all 47 species
GSVIVT01012779001 No alias O-fucosyltransferase 9 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Len_g19755 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species
Pir_g01024 No alias fucosyl transferase (ESMD) involved in pectin-dependent... 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
BP GO:0008150 biological_process IEP HCCA
BP GO:0009057 macromolecule catabolic process IEP HCCA
BP GO:0009987 cellular process IEP HCCA
MF GO:0015399 primary active transmembrane transporter activity IEP HCCA
CC GO:0019773 proteasome core complex, alpha-subunit complex IEP HCCA
BP GO:0019941 modification-dependent protein catabolic process IEP HCCA
MF GO:0022804 active transmembrane transporter activity IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
BP GO:0043632 modification-dependent macromolecule catabolic process IEP HCCA
BP GO:0044248 cellular catabolic process IEP HCCA
BP GO:0044265 cellular macromolecule catabolic process IEP HCCA
BP GO:0051603 proteolysis involved in protein catabolic process IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019378 GDP-Fuc_O-FucTrfase 171 502
No external refs found!