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  5. Sam_g25601

Sam_g25601


Description : regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin ring complex & original description: none


Gene families : OG0003254 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003254_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25601

Target Alias Description ECC score Gene Family Method Actions
Aob_g10885 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.02 OrthoFinder output from all 47 species
Ceric.09G082900.1 NEDD1, Ceric.09G082900 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000144.81 NEDD1 Protein NEDD1 OS=Arabidopsis thaliana 0.01 OrthoFinder output from all 47 species
Cre13.g565150 No alias No description available 0.01 OrthoFinder output from all 47 species
LOC_Os09g09470.1 NEDD1, LOC_Os09g09470 regulatory component GCP-WD/NEDD1 of gamma-Tubulin ring... 0.03 OrthoFinder output from all 47 species
Msp_g13899 NEDD1 regulatory component *(GCP-WD/NEDD1) of gamma-Tubulin... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000808 origin recognition complex IEP HCCA
MF GO:0005515 protein binding IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006139 nucleobase-containing compound metabolic process IEP HCCA
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0006260 DNA replication IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
BP GO:0006888 endoplasmic reticulum to Golgi vesicle-mediated transport IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007010 cytoskeleton organization IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008081 phosphoric diester hydrolase activity IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0030117 membrane coat IEP HCCA
CC GO:0030120 vesicle coat IEP HCCA
CC GO:0030127 COPII vesicle coat IEP HCCA
CC GO:0032991 protein-containing complex IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
CC GO:0043227 membrane-bounded organelle IEP HCCA
CC GO:0043231 intracellular membrane-bounded organelle IEP HCCA
BP GO:0048193 Golgi vesicle transport IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA

No InterPro domains available for this sequence

No external refs found!