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  5. Sam_g25287

Sam_g25287


Description : not classified & original description: none


Gene families : OG0000214 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000214_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25287
Cluster HCCA: Cluster_115

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00049p00169350 evm_27.TU.AmTr_v1... Protein STICHEL-like 2 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
AMTR_s00130p00061410 evm_27.TU.AmTr_v1... Protein STICHEL-like 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
Adi_g003362 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g11291 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g51975 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g08476 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g24487 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0037.g025896 No alias not classified & original description: CDS=287-3238 0.03 OrthoFinder output from all 47 species
Cba_g12772 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g37887 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.09G075500.1 STI, Ceric.09G075500 not classified & original description: pacid=50588395... 0.03 OrthoFinder output from all 47 species
Dac_g21029 STI not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g07167 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g02399 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g12871 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g18838 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g29947 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g21139 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Len_g27939 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Len_g54134 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436743g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Msp_g13330 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g32095 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g12151 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26781 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g29021 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g43940 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g58288 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g17381 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g25286 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g12357 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g18267 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g24164 STI not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g09165 STI not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0003746 translation elongation factor activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
BP GO:0006414 translational elongation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
InterPro domains Description Start Stop
IPR022754 DNA_pol_III_gamma-3 367 434
No external refs found!