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  5. Sam_g25259

Sam_g25259


Description : not classified & original description: none


Gene families : OG0013800 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0013800_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25259

Target Alias Description ECC score Gene Family Method Actions
Als_g61124 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12836 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g17228 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g22557 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30057 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0009055 electron transfer activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
MF GO:0016830 carbon-carbon lyase activity IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 235 281
IPR002885 Pentatricopeptide_repeat 310 332
No external refs found!