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  5. Sam_g25246

Sam_g25246


Description : not classified & original description: none


Gene families : OG0000844 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000844_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25246

Target Alias Description ECC score Gene Family Method Actions
AT4G35740 RecQl3, ATRECQ3 DEAD/DEAH box RNA helicase family protein 0.03 OrthoFinder output from all 47 species
Aev_g29073 RecQl3, ATRECQ3 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0503.g073906 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Dcu_g06356 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Ehy_g19620 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Mp7g16800.1 RecQl3, ATRECQ3 ATP-dependent DNA helicase Q-like 3 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Nbi_g29303 MED34, ATRECQ2, RECQL2 component *(MED34) of MEDIATOR transcription... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0117.g021122 MED34, ATRECQ2, RECQL2 not classified & original description: CDS=82-2226 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0000139 Golgi membrane IEP HCCA
MF GO:0005338 nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0015165 pyrimidine nucleotide-sugar transmembrane transporter activity IEP HCCA
BP GO:0015780 nucleotide-sugar transmembrane transport IEP HCCA
BP GO:0015931 nucleobase-containing compound transport IEP HCCA
MF GO:0015932 nucleobase-containing compound transmembrane transporter activity IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
CC GO:0031090 organelle membrane IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
BP GO:0090481 pyrimidine nucleotide-sugar transmembrane transport IEP HCCA
CC GO:0098588 bounding membrane of organelle IEP HCCA
BP GO:1901264 carbohydrate derivative transport IEP HCCA
MF GO:1901505 carbohydrate derivative transmembrane transporter activity IEP HCCA

No InterPro domains available for this sequence

No external refs found!