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  5. Sam_g25240

Sam_g25240


Description : not classified & original description: none


Gene families : OG0005304 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005304_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25240
Cluster HCCA: Cluster_181

Target Alias Description ECC score Gene Family Method Actions
Als_g49629 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene21535.t1 Aspi01Gene21535 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0004.g008390 No alias not classified & original description: CDS=262-1686 0.02 OrthoFinder output from all 47 species
Ehy_g16866 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g39226 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10428744g0010 No alias no hits & (original description: none) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0004.g002322 No alias not classified & original description: CDS=430-2007 0.03 OrthoFinder output from all 47 species
Sam_g15878 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Solyc02g090850.3.1 Solyc02g090850 no hits & (original description: none) 0.04 OrthoFinder output from all 47 species
Zm00001e001915_P001 Zm00001e001915 no hits & (original description: none) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003873 6-phosphofructo-2-kinase activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0005996 monosaccharide metabolic process IEP HCCA
BP GO:0006000 fructose metabolic process IEP HCCA
BP GO:0006886 intracellular protein transport IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0008270 zinc ion binding IEP HCCA
MF GO:0008443 phosphofructokinase activity IEP HCCA
MF GO:0019200 carbohydrate kinase activity IEP HCCA
BP GO:0019318 hexose metabolic process IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0046914 transition metal ion binding IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR019147 SWAP_N_domain 41 177
No external refs found!