Sam_g25224


Description : not classified & original description: none


Gene families : OG0000975 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000975_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25224
Cluster HCCA: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
AT1G59850 No alias ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
AT4G27060 TOR1, CN, SPR2 ARM repeat superfamily protein 0.02 OrthoFinder output from all 47 species
Aev_g17645 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.03 OrthoFinder output from all 47 species
Aev_g20076 TOR1, CN, SPR2 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene45510.t1 TOR1, CN, SPR2,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0706.g082698 TOR1, CN, SPR2 not classified & original description: CDS=1-3414 0.03 OrthoFinder output from all 47 species
Azfi_s1899.g107904 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ceric.28G043900.1 TOR1, CN, SPR2,... not classified & original description: pacid=50569898... 0.04 OrthoFinder output from all 47 species
Dac_g11345 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Ehy_g07055 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
GSVIVT01007847001 No alias TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
LOC_Os02g50640.1 LOC_Os02g50640 TORTIFOLIA1-like protein 3 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
LOC_Os07g33630.1 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species
LOC_Os09g38710.2 LOC_Os09g38710 TORTIFOLIA1-like protein 2 OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Len_g10741 TOR1, CN, SPR2 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_10436002g0010 TOR1, CN, SPR2 microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0092.g018881 TOR1, CN, SPR2 not classified & original description: CDS=806-3748 0.03 OrthoFinder output from all 47 species
Tin_g13606 TOR1, CN, SPR2 regulatory protein *(SPR2) of MT minus-end stability &... 0.02 OrthoFinder output from all 47 species
Zm00001e035114_P002 TOR1, CN, SPR2,... microtubule growth pause state regulator (SPR2) 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP HCCA
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007165 signal transduction IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
BP GO:0035556 intracellular signal transduction IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!