Sam_g25172


Description : E1 ubiquitin-activating enzyme & original description: none


Gene families : OG0000675 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000675_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25172

Target Alias Description ECC score Gene Family Method Actions
AT5G06460 ATUBA2, UBA 2 ubiquitin activating enzyme 2 0.03 OrthoFinder output from all 47 species
Adi_g001009 UBA1, MOS5, ATUBA1 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18272 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g05605 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g06084 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g17749 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Cre09.g386400 ATUBA2, UBA 2 Protein degradation.peptide tagging.Ubiquitin... 0.01 OrthoFinder output from all 47 species
Ehy_g08656 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
GSVIVT01024680001 UBA1, MOS5, ATUBA1 Protein degradation.peptide tagging.Ubiquitin... 0.03 OrthoFinder output from all 47 species
Gb_00042 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
Gb_06843 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
MA_10436758g0010 UBA1, MOS5, ATUBA1 Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum... 0.02 OrthoFinder output from all 47 species
MA_107903g0010 UBA1, MOS5, ATUBA1 ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
MA_126865g0010 UBA1, MOS5, ATUBA1 Ubiquitin-activating enzyme E1 2 OS=Triticum aestivum... 0.02 OrthoFinder output from all 47 species
Mp4g15300.1 ATUBA2, UBA 2 ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
Ore_g06607 UBA1, MOS5, ATUBA1 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g11819 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g12227 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Pnu_g18835 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g17842 UBA1, MOS5, ATUBA1 E1 ubiquitin-activating enzyme & original description: none 0.03 OrthoFinder output from all 47 species
Solyc09g018450.3.1 UBA1, MOS5,... ubiquitin-activating E1 protein 0.03 OrthoFinder output from all 47 species
Tin_g11189 UBA1, MOS5, ATUBA1 E1 ubiquiTin-activaTing enzyme & original description: none 0.04 OrthoFinder output from all 47 species
Zm00001e009293_P001 ATUBA2, UBA 2,... ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species
Zm00001e023945_P001 UBA1, MOS5,... ubiquitin-activating E1 protein 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0005096 GTPase activator activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
MF GO:0008047 enzyme activator activity IEP HCCA
MF GO:0019899 enzyme binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0030695 GTPase regulator activity IEP HCCA
MF GO:0031267 small GTPase binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0051020 GTPase binding IEP HCCA
MF GO:0060589 nucleoside-triphosphatase regulator activity IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0140677 molecular function activator activity IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR032418 E1_FCCH 221 291
IPR032420 E1_4HB 292 362
IPR000594 ThiF_NAD_FAD-bd 445 943
IPR018965 Ub-activating_enz_E1_C 954 1043
IPR000594 ThiF_NAD_FAD-bd 47 431
IPR019572 UBA_E1_SCCH 631 884
No external refs found!