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  5. Sam_g25136

Sam_g25136


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25136

Target Alias Description ECC score Gene Family Method Actions
AT5G63490 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.04 OrthoFinder output from all 47 species
Azfi_s0315.g064284 No alias not classified & original description: CDS=310-1998 0.03 OrthoFinder output from all 47 species
Ceric.07G021100.1 Ceric.07G021100 not classified & original description: pacid=50627549... 0.02 OrthoFinder output from all 47 species
GSVIVT01008562001 No alias CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
LOC_Os11g30350.1 LOC_Os11g30350 CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e028438_P001 Zm00001e028438 CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004779 sulfate adenylyltransferase activity IEP HCCA
MF GO:0004781 sulfate adenylyltransferase (ATP) activity IEP HCCA
BP GO:0006486 protein glycosylation IEP HCCA
BP GO:0006487 protein N-linked glycosylation IEP HCCA
MF GO:0008194 UDP-glycosyltransferase activity IEP HCCA
MF GO:0008375 acetylglucosaminyltransferase activity IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016758 hexosyltransferase activity IEP HCCA
MF GO:0016779 nucleotidyltransferase activity IEP HCCA
MF GO:0030144 alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase activity IEP HCCA
BP GO:0043413 macromolecule glycosylation IEP HCCA
BP GO:0070085 glycosylation IEP HCCA
MF GO:0070566 adenylyltransferase activity IEP HCCA
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP HCCA
InterPro domains Description Start Stop
IPR000644 CBS_dom 299 342
IPR000644 CBS_dom 240 285
IPR000644 CBS_dom 132 177
IPR000644 CBS_dom 72 118
IPR000270 PB1_dom 420 502
No external refs found!