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  5. Sam_g25135

Sam_g25135


Description : not classified & original description: none


Gene families : OG0002269 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002269_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25135
Cluster HCCA: Cluster_44

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00013p00090250 evm_27.TU.AmTr_v1... CBS domain-containing protein CBSCBSPB5 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
AT5G63490 No alias CBS / octicosapeptide/Phox/Bemp1 (PB1) domains-containing protein 0.03 OrthoFinder output from all 47 species
Adi_g010184 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene27737.t1 Aspi01Gene27737 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.07G021100.1 Ceric.07G021100 not classified & original description: pacid=50627549... 0.02 OrthoFinder output from all 47 species
Mp1g14420.1 No alias CBS domain-containing protein CBSCBSPB3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Msp_g24434 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g04892 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Zm00001e021428_P001 Zm00001e021428 CBS domain-containing protein CBSCBSPB4 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP HCCA
MF GO:0008168 methyltransferase activity IEP HCCA
MF GO:0008234 cysteine-type peptidase activity IEP HCCA
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP HCCA
MF GO:0016741 transferase activity, transferring one-carbon groups IEP HCCA
MF GO:0043169 cation binding IEP HCCA
MF GO:0046872 metal ion binding IEP HCCA
InterPro domains Description Start Stop
IPR000270 PB1_dom 420 502
IPR000644 CBS_dom 299 342
IPR000644 CBS_dom 240 285
IPR000644 CBS_dom 132 177
IPR000644 CBS_dom 72 118
No external refs found!