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  5. Sam_g25122

Sam_g25122


Description : not classified & original description: none


Gene families : OG0000038 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g25122

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00021p00119940 TBL34,... No description available 0.01 OrthoFinder output from all 47 species
Adi_g008906 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g106970 TBL11 rhamnogalacturonan-I O-acetyltransferase *(TBL) &... 0.02 OrthoFinder output from all 47 species
Aspi01Gene04675.t1 TBL18, Aspi01Gene04675 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g29961 TBL12 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.01G104400.1 TBL5, Ceric.01G104400 polysaccharide O-acetyltransferase *(TBR) & original... 0.02 OrthoFinder output from all 47 species
Dcu_g01764 TBL7 not classified & original description: none 0.01 OrthoFinder output from all 47 species
Dcu_g10009 TBL13 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g10334 TBL13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
MA_69588g0010 TBL14 Protein trichome birefringence-like 14 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g47835 TBL5 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g41943 TBL13 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51488 TBL21 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g06009 TBL7 not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0016740 transferase activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003697 single-stranded DNA binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005525 GTP binding IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0018142 protein-DNA covalent cross-linking IEP HCCA
BP GO:0018143 nucleic acid-protein covalent cross-linking IEP HCCA
MF GO:0019001 guanyl nucleotide binding IEP HCCA
MF GO:0032561 guanyl ribonucleotide binding IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
MF GO:0043015 gamma-tubulin binding IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA
InterPro domains Description Start Stop
IPR026057 PC-Esterase 121 320
No external refs found!