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  5. Sam_g24970

Sam_g24970


Description : not classified & original description: none


Gene families : OG0003147 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003147_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24970

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00022p00116300 BUBR1,... Cell cycle.mitosis and meiosis.sister chromatid... 0.08 OrthoFinder output from all 47 species
AT2G33560 BUBR1 BUB1-related (BUB1: budding uninhibited by benzymidazol 1) 0.12 OrthoFinder output from all 47 species
AT5G05510 No alias Mad3/BUB1 homology region 1 0.03 OrthoFinder output from all 47 species
Als_g05447 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.07 OrthoFinder output from all 47 species
Aop_g01182 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.14 OrthoFinder output from all 47 species
Aspi01Gene63524.t1 BUBR1, Aspi01Gene63524 spindle assembly checkpoint protein *(MAD3) & original... 0.07 OrthoFinder output from all 47 species
Azfi_s0064.g035683 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.03 OrthoFinder output from all 47 species
Azfi_s0544.g076394 No alias not classified & original description: CDS=112-1563 0.03 OrthoFinder output from all 47 species
Cpa|evm.model.tig00000037.22 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.03 OrthoFinder output from all 47 species
Cre07.g351450 BUBR1 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis thaliana 0.03 OrthoFinder output from all 47 species
GSVIVT01013446001 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.16 OrthoFinder output from all 47 species
GSVIVT01032774001 No alias Cell cycle.mitosis and meiosis.sister chromatid... 0.08 OrthoFinder output from all 47 species
Gb_15966 No alias no hits & (original description: none) 0.12 OrthoFinder output from all 47 species
Gb_18619 BUBR1 MAD3/BUBR1 spindle assembly checkpoint protein 0.15 OrthoFinder output from all 47 species
LOC_Os02g10020.1 BUBR1, LOC_Os02g10020 MAD3/BUBR1 spindle assembly checkpoint protein 0.07 OrthoFinder output from all 47 species
LOC_Os12g03180.1 LOC_Os12g03180 MAD3/BUBR1 spindle assembly checkpoint protein 0.04 OrthoFinder output from all 47 species
Len_g15512 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Len_g20532 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.13 OrthoFinder output from all 47 species
MA_213025g0010 No alias no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
MA_97040g0010 BUBR1 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis... 0.08 OrthoFinder output from all 47 species
Msp_g03172 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g04683 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.17 OrthoFinder output from all 47 species
Ppi_g10004 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Smo404118 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.07 OrthoFinder output from all 47 species
Smo404289 BUBR1 Cell cycle.mitosis and meiosis.sister chromatid... 0.05 OrthoFinder output from all 47 species
Solyc06g051040.4.1 Solyc06g051040 MAD3/BUBR1 spindle assembly checkpoint protein 0.05 OrthoFinder output from all 47 species
Spa_g20707 BUBR1 spindle assembly checkpoint protein *(MAD3) & original... 0.11 OrthoFinder output from all 47 species
Zm00001e014092_P001 BUBR1, Zm00001e014092 MAD3/BUBR1 spindle assembly checkpoint protein 0.11 OrthoFinder output from all 47 species
Zm00001e025052_P001 BUBR1, Zm00001e025052 Mitotic spindle checkpoint protein BUBR1 OS=Arabidopsis... 0.06 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000166 nucleotide binding IEP HCCA
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0005488 binding IEP HCCA
MF GO:0005515 protein binding IEP HCCA
MF GO:0005524 ATP binding IEP HCCA
CC GO:0005694 chromosome IEP HCCA
BP GO:0006996 organelle organization IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
BP GO:0007034 vacuolar transport IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008092 cytoskeletal protein binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
MF GO:0017076 purine nucleotide binding IEP HCCA
MF GO:0030554 adenyl nucleotide binding IEP HCCA
MF GO:0032553 ribonucleotide binding IEP HCCA
MF GO:0032555 purine ribonucleotide binding IEP HCCA
MF GO:0032559 adenyl ribonucleotide binding IEP HCCA
MF GO:0035639 purine ribonucleoside triphosphate binding IEP HCCA
MF GO:0036094 small molecule binding IEP HCCA
MF GO:0043167 ion binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046907 intracellular transport IEP HCCA
BP GO:0051276 chromosome organization IEP HCCA
BP GO:0051649 establishment of localization in cell IEP HCCA
MF GO:0097159 organic cyclic compound binding IEP HCCA
MF GO:0097367 carbohydrate derivative binding IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
MF GO:1901265 nucleoside phosphate binding IEP HCCA
MF GO:1901363 heterocyclic compound binding IEP HCCA

No InterPro domains available for this sequence

No external refs found!