Sam_g24886


Description : not classified & original description: none


Gene families : OG0002918 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002918_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24886

Target Alias Description ECC score Gene Family Method Actions
AT1G11070 No alias BEST Arabidopsis thaliana protein match is:... 0.03 OrthoFinder output from all 47 species
AT4G04980 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.02 OrthoFinder output from all 47 species
Als_g51710 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g09707 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene61424.t2 Aspi01Gene61424 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0140.g051295 No alias not classified & original description: CDS=242-2218 0.03 OrthoFinder output from all 47 species
Azfi_s0880.g091021 No alias not classified & original description: CDS=1-2652 0.03 OrthoFinder output from all 47 species
Cba_g14544 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.16G012800.1 Ceric.16G012800 not classified & original description: pacid=50590071... 0.08 OrthoFinder output from all 47 species
Dac_g01774 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g01950 No alias LRR-domain extensin & original description: none 0.03 OrthoFinder output from all 47 species
Len_g59211 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g16488 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g14991 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g05879 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Nbi_g20616 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18065 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g01327 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Spa_g12627 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g16558 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g51001 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Spa_g54907 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
MF GO:0003674 molecular_function IEP HCCA
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006508 proteolysis IEP HCCA
MF GO:0008233 peptidase activity IEP HCCA
MF GO:0008236 serine-type peptidase activity IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
MF GO:0016872 intramolecular lyase activity IEP HCCA
MF GO:0017171 serine hydrolase activity IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA

No InterPro domains available for this sequence

No external refs found!