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  5. Sam_g24875

Sam_g24875


Description : regulatory factor *(TZF) of mRNA stress granule formation & original description: none


Gene families : OG0000156 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000156_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24875

Target Alias Description ECC score Gene Family Method Actions
Als_g10851 No alias regulatory factor *(TZF) of mRNA stress granule... 0.03 OrthoFinder output from all 47 species
Cre01.g031004 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.01 OrthoFinder output from all 47 species
Cre03.g144947 No alias RNA biosynthesis.transcriptional activation.C3H zinc... 0.02 OrthoFinder output from all 47 species
Ehy_g04847 SZF2, ATSZF2, ZFAR1, CZF1 regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Ehy_g08338 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Nbi_g03800 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Pir_g00662 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species
Spa_g08790 No alias regulatory factor *(TZF) of mRNA stress granule... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
MF GO:0140096 catalytic activity, acting on a protein IEP HCCA
InterPro domains Description Start Stop
IPR000571 Znf_CCCH 313 333
IPR002110 Ankyrin_rpt 76 155
No external refs found!