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  5. Sam_g24724

Sam_g24724


Description : EC_2.2 transferase transferring aldehyde or ketonic group & original description: none


Gene families : OG0001325 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001325_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24724

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00192810 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species
AT3G21500 DXPS1 1-deoxy-D-xylulose 5-phosphate synthase 1 0.02 OrthoFinder output from all 47 species
Adi_g002037 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Aob_g06658 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Azfi_s0021.g015690 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.04 OrthoFinder output from all 47 species
Gb_22616 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.03 OrthoFinder output from all 47 species
Gb_40956 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.03 OrthoFinder output from all 47 species
MA_10426889g0010 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.02 OrthoFinder output from all 47 species
MA_97345g0010 CLA, DXS, CLA1,... 1-deoxy-D-xylulose 5-phosphate synthase (DXS) 0.03 OrthoFinder output from all 47 species
Msp_g22124 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Ore_g27687 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Ore_g37260 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Ore_g43427 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.03 OrthoFinder output from all 47 species
Ppi_g29782 CLA, DXS, CLA1,... EC_2.2 transferase transferring aldehyde or ketonic... 0.02 OrthoFinder output from all 47 species
Sam_g10011 No alias EC_2.2 transferase transferring aldehyde or ketonic... 0.05 OrthoFinder output from all 47 species
Smo143534 CLA, DXS, CLA1,... Secondary metabolism.terpenoids.methylerythritol... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008661 1-deoxy-D-xylulose-5-phosphate synthase activity IEA Interproscan
BP GO:0016114 terpenoid biosynthetic process IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0055085 transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR005477 Dxylulose-5-P_synthase 76 361
IPR033248 Transketolase_C 577 700
IPR005475 Transketolase-like_Pyr-bd 399 559
No external refs found!