AMTR_s00029p00153350 (evm_27.TU.AmTr_v1.0_sc...)


Aliases : evm_27.TU.AmTr_v1.0_scaffold00029.181

Description : Protein degradation.peptide tagging.Ubiquitin (UBQ)-anchor addition (ubiquitylation).UBQ-ligase E3 activities.Cullin-based ubiquitylation complexes.SKP1-CUL1-FBX (SCF) E3 ligase complexes.SKP1/ASK1 target protein binding component


Gene families : OG_01_0000418 (Archaeplastida) Phylogenetic Tree(s): OG_01_0000418_tree ,
OG_02_0000338 (LandPlants) Phylogenetic Tree(s): OG_02_0000338_tree ,
OG_03_0000762 (SeedPlants) Phylogenetic Tree(s): OG_03_0000762_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: AMTR_s00029p00153350
Cluster HCCA: Cluster_192

Target Alias Description ECC score Gene Family Method Actions
LOC_Os11g26910.1 No alias target protein binding component SKP1/ASK1 of... 0.03 Archaeplastida
MA_10428641g0010 No alias target protein binding component SKP1/ASK1 of... 0.02 Archaeplastida
MA_82940g0020 No alias target protein binding component SKP1/ASK1 of... 0.04 Archaeplastida
Mp3g00120.1 No alias target protein binding component SKP1/ASK1 of... 0.05 Archaeplastida
Pp3c20_7590V3.1 No alias S phase kinase-associated protein 1 0.01 Archaeplastida
Pp3c20_7680V3.1 No alias S phase kinase-associated protein 1 0.01 Archaeplastida
Pp3c2_5520V3.1 No alias S phase kinase-associated protein 1 0.02 Archaeplastida
Zm00001e021478_P001 No alias target protein binding component SKP1/ASK1 of... 0.02 Archaeplastida
LOC_Os11g26910.1 No alias target protein binding component SKP1/ASK1 of... 0.03 LandPlants
MA_82940g0020 No alias target protein binding component SKP1/ASK1 of... 0.04 LandPlants
Mp3g00120.1 No alias target protein binding component SKP1/ASK1 of... 0.05 LandPlants
Mp5g10050.2 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
Pp3c20_7590V3.1 No alias S phase kinase-associated protein 1 0.01 LandPlants
Pp3c20_7680V3.1 No alias S phase kinase-associated protein 1 0.01 LandPlants
Pp3c2_5520V3.1 No alias S phase kinase-associated protein 1 0.02 LandPlants
Solyc11g042930.2.1 No alias target protein binding component SKP1/ASK1 of... 0.01 LandPlants
Zm00001e021478_P001 No alias target protein binding component SKP1/ASK1 of... 0.02 LandPlants
LOC_Os11g26910.1 No alias target protein binding component SKP1/ASK1 of... 0.03 SeedPlants
MA_82940g0020 No alias target protein binding component SKP1/ASK1 of... 0.02 SeedPlants
Solyc11g042930.2.1 No alias target protein binding component SKP1/ASK1 of... 0.01 SeedPlants

Type GO Term Name Evidence Source
BP GO:0006511 ubiquitin-dependent protein catabolic process IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR016073 Skp1_comp_POZ 6 65
IPR016072 Skp1_comp_dimer 80 157
No external refs found!