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  5. Sam_g24520

Sam_g24520


Description : Sar1-GTPase-regulating protein *(Sec16) & original description: none


Gene families : OG0001407 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001407_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24520
Cluster HCCA: Cluster_141

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00019p00148170 evm_27.TU.AmTr_v1... Vesicle trafficking.Coat protein II (COPII) coatomer... 0.03 OrthoFinder output from all 47 species
AT5G47480 No alias RGPR-related 0.05 OrthoFinder output from all 47 species
Adi_g054382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Azfi_s0781.g086689 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.03 OrthoFinder output from all 47 species
Ceric.06G071900.1 Ceric.06G071900 Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Ehy_g05109 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
GSVIVT01004707001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.06 OrthoFinder output from all 47 species
GSVIVT01018158001 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Gb_04674 No alias Sar1-GTPase-regulating protein (Sec16) 0.04 OrthoFinder output from all 47 species
LOC_Os02g01490.1 LOC_Os02g01490 Sar1-GTPase-regulating protein (Sec16) 0.02 OrthoFinder output from all 47 species
Lfl_g04293 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.04 OrthoFinder output from all 47 species
Mp1g19530.1 No alias Sar1-GTPase-regulating protein (Sec16) 0.02 OrthoFinder output from all 47 species
Ore_g08909 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.05 OrthoFinder output from all 47 species
Pir_g15145 No alias Sar1-GTPase-regulating protein *(Sec16) & original... 0.02 OrthoFinder output from all 47 species
Smo446951 No alias Vesicle trafficking.Coat protein II (COPII) coatomer... 0.02 OrthoFinder output from all 47 species
Zm00001e013404_P001 Zm00001e013404 Sar1-GTPase-regulating protein (Sec16) 0.05 OrthoFinder output from all 47 species
Zm00001e025399_P002 Zm00001e025399 Sar1-GTPase-regulating protein (Sec16) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006082 organic acid metabolic process IEP HCCA
BP GO:0006629 lipid metabolic process IEP HCCA
BP GO:0006631 fatty acid metabolic process IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
BP GO:0019752 carboxylic acid metabolic process IEP HCCA
BP GO:0032787 monocarboxylic acid metabolic process IEP HCCA
BP GO:0043436 oxoacid metabolic process IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR024340 Sec16_CCD 701 811
IPR024298 ACE1_Sec16_Sec31 875 1164
No external refs found!