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  5. Sam_g24249

Sam_g24249


Description : not classified & original description: none


Gene families : OG0003230 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003230_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24249
Cluster HCCA: Cluster_135

Target Alias Description ECC score Gene Family Method Actions
Adi_g085678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cre04.g225050 No alias Protein translocation.chloroplast.inner envelope TIC... 0.02 OrthoFinder output from all 47 species
Dde_g26386 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g35043 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
LOC_Os02g49470.1 LOC_Os02g49470 Protein TIC 20-v, chloroplastic OS=Arabidopsis thaliana... 0.03 OrthoFinder output from all 47 species
Nbi_g01746 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g05491 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0075.g017405 No alias not classified & original description: CDS=1-657 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004359 glutaminase activity IEP HCCA
BP GO:0006081 cellular aldehyde metabolic process IEP HCCA
BP GO:0006725 cellular aromatic compound metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009523 photosystem II IEP HCCA
CC GO:0009654 photosystem II oxygen evolving complex IEP HCCA
BP GO:0015969 guanosine tetraphosphate metabolic process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP HCCA
MF GO:0016811 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides IEP HCCA
BP GO:0019637 organophosphate metabolic process IEP HCCA
CC GO:0019898 extrinsic component of membrane IEP HCCA
BP GO:0033865 nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0033875 ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034032 purine nucleoside bisphosphate metabolic process IEP HCCA
BP GO:0034035 purine ribonucleoside bisphosphate metabolic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042816 vitamin B6 metabolic process IEP HCCA
BP GO:0042819 vitamin B6 biosynthetic process IEP HCCA
BP GO:0042822 pyridoxal phosphate metabolic process IEP HCCA
BP GO:0042823 pyridoxal phosphate biosynthetic process IEP HCCA
BP GO:0044281 small molecule metabolic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046184 aldehyde biosynthetic process IEP HCCA
BP GO:0046483 heterocycle metabolic process IEP HCCA
BP GO:0072524 pyridine-containing compound metabolic process IEP HCCA
BP GO:0072525 pyridine-containing compound biosynthetic process IEP HCCA
BP GO:1901360 organic cyclic compound metabolic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA
CC GO:1990204 oxidoreductase complex IEP HCCA
InterPro domains Description Start Stop
IPR005691 Tic20 60 202
No external refs found!