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  5. Sam_g24144

Sam_g24144


Description : not classified & original description: none


Gene families : OG0001529 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001529_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24144
Cluster HCCA: Cluster_107

Target Alias Description ECC score Gene Family Method Actions
AT5G22270 No alias unknown protein; BEST Arabidopsis thaliana protein match... 0.03 OrthoFinder output from all 47 species
Aev_g10367 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g46838 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ceric.31G059400.1 Ceric.31G059400 not classified & original description: pacid=50573830... 0.03 OrthoFinder output from all 47 species
Ceric.31G059500.1 Ceric.31G059500 not classified & original description: pacid=50574054... 0.02 OrthoFinder output from all 47 species
LOC_Os03g45870.1 LOC_Os03g45870 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Pnu_g25752 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0033.g011000 No alias not classified & original description: CDS=157-1332 0.03 OrthoFinder output from all 47 species
Smo442011 No alias No description available 0.03 OrthoFinder output from all 47 species
Solyc01g007870.3.1 Solyc01g007870 no hits & (original description: none) 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0003677 DNA binding IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005544 calcium-dependent phospholipid binding IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
MF GO:0030599 pectinesterase activity IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0042545 cell wall modification IEP HCCA
BP GO:0045229 external encapsulating structure organization IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0071554 cell wall organization or biogenesis IEP HCCA
BP GO:0071555 cell wall organization IEP HCCA

No InterPro domains available for this sequence

No external refs found!