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  5. Sam_g24075

Sam_g24075


Description : subfamily ABCG transporter & original description: none


Gene families : OG0000139 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000139_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g24075

Target Alias Description ECC score Gene Family Method Actions
Aev_g05451 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g39654 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g02213 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g04588 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g08566 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g26274 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Als_g18492 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Als_g19815 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g31284 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene47189.t1 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene47192.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene56079.t1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0012.g012801 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=1-2178 0.04 OrthoFinder output from all 47 species
Azfi_s0123.g048394 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=209-2359 0.05 OrthoFinder output from all 47 species
Ceric.05G037000.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Ceric.05G037200.1 ATWBC11, ABCG11,... subfamily ABCG transporter & original description:... 0.02 OrthoFinder output from all 47 species
Dac_g06946 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g15022 No alias subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dcu_g42918 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g25067 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.05 OrthoFinder output from all 47 species
GSVIVT01002949001 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.02 OrthoFinder output from all 47 species
Gb_16311 No alias ABC transporter G family member 3 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
LOC_Os09g03939.1 ATWBC11, ABCG11,... subfamily ABCG transporter 0.01 OrthoFinder output from all 47 species
LOC_Os10g35180.1 ATWBC11, ABCG11,... suberin/cutin lipid exporter (DSO). subfamily ABCG transporter 0.02 OrthoFinder output from all 47 species
Lfl_g08640 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Lfl_g37886 ATWBC11, ABCG11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g15583 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g29286 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.08 OrthoFinder output from all 47 species
Ore_g16912 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.04 OrthoFinder output from all 47 species
Pnu_g01678 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45722 ATWBC11, ABCG11,... not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0089.g018713 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: CDS=276-2255 0.04 OrthoFinder output from all 47 species
Sam_g11014 No alias subfamily ABCG transporter & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g34684 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo231246 ATWBC11, ABCG11,... Solute transport.primary active transport.ABC... 0.05 OrthoFinder output from all 47 species
Tin_g21787 ATWBC11, ABCG11,... subfamily ABCG transporter & original description: none 0.07 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
CC GO:0016020 membrane IEA Interproscan
MF GO:0140359 ABC-type transporter activity IEA Interproscan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Start Stop
IPR043926 ABCG_dom 243 329
IPR003439 ABC_transporter-like_ATP-bd 64 214
IPR013525 ABC_2_trans 364 574
No external refs found!