Sam_g23971


Description : not classified & original description: none


Gene families : OG0003008 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003008_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23971
Cluster HCCA: Cluster_146

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00171p00041870 evm_27.TU.AmTr_v1... No description available 0.02 OrthoFinder output from all 47 species
Adi_g042340 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g01108 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g02068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0207.g057900 No alias not classified & original description: CDS=92-976 0.03 OrthoFinder output from all 47 species
Cba_g08946 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ceric.07G080500.1 Ceric.07G080500 not classified & original description: pacid=50627306... 0.04 OrthoFinder output from all 47 species
Ore_g37795 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0125.g021699 No alias not classified & original description: CDS=139-906 0.03 OrthoFinder output from all 47 species
Spa_g19058 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0000724 double-strand break repair via homologous recombination IEP HCCA
BP GO:0000725 recombinational repair IEP HCCA
MF GO:0004045 aminoacyl-tRNA hydrolase activity IEP HCCA
CC GO:0005667 transcription regulator complex IEP HCCA
CC GO:0005672 transcription factor TFIIA complex IEP HCCA
BP GO:0006281 DNA repair IEP HCCA
BP GO:0006302 double-strand break repair IEP HCCA
BP GO:0006310 DNA recombination IEP HCCA
BP GO:0006352 DNA-templated transcription initiation IEP HCCA
BP GO:0006367 transcription initiation at RNA polymerase II promoter IEP HCCA
BP GO:0006974 cellular response to DNA damage stimulus IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
BP GO:0033554 cellular response to stress IEP HCCA
BP GO:0051716 cellular response to stimulus IEP HCCA
MF GO:0052689 carboxylic ester hydrolase activity IEP HCCA
BP GO:0090304 nucleic acid metabolic process IEP HCCA
CC GO:0090575 RNA polymerase II transcription regulator complex IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140640 catalytic activity, acting on a nucleic acid IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
InterPro domains Description Start Stop
IPR021920 DUF3531 132 269
No external refs found!