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  5. Sam_g23944

Sam_g23944


Description : acireductone dioxygenase *(ARD) & original description: none


Gene families : OG0000454 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000454_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23944

Target Alias Description ECC score Gene Family Method Actions
Aspi01Gene17156.t1 ARD4, ATARD4,... acireductone dioxygenase *(ARD) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0022.g016238 ATARD1, ARD1 acireductone dioxygenase *(ARD) & original description:... 0.03 OrthoFinder output from all 47 species
Cba_g23418 ARD4, ATARD4 acireductone dioxygenase *(ARD) & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g19122 ATARD2 acireductone dioxygenase *(ARD) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g04469 ATARD1, ARD1 acireductone dioxygenase *(ARD) & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g20862 ATARD2 acireductone dioxygenase *(ARD) & original description: none 0.04 OrthoFinder output from all 47 species
MA_15423g0020 ATARD2 acireductone dioxygenase 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0011.g004987 ATARD2 acireductone dioxygenase *(ARD) & original description:... 0.03 OrthoFinder output from all 47 species
Spa_g17735 ARD4, ATARD4 acireductone dioxygenase *(ARD) & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g19551 ATARD1, ARD1 acireductone dioxygenase *(ARD) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
BP GO:0006355 regulation of DNA-templated transcription IEP HCCA
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP HCCA
BP GO:0051252 regulation of RNA metabolic process IEP HCCA
BP GO:1903506 regulation of nucleic acid-templated transcription IEP HCCA
BP GO:2001141 regulation of RNA biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004313 ARD 17 167
No external refs found!