Sam_g23906

Description : not classified & original description: none

Gene families : OG0003485 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0003485_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g23906

Target	Alias	Description	ECC score	Gene Family Method
Adi_g016782	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g084102	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Adi_g086874	ATH-A, CESA2, ATCESA2	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Adi_g096899	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Ala_g33358	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g42653	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Als_g63205	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ehy_g21506	AtCESA1, RSW1, CESA1	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Sam_g04122	No alias	not classified & original description: none	0.02	OrthoFinder output from all 47 species
Spa_g17564	CESA6, PRC1, IXR2, E112	not classified & original description: none	0.02	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
BP	GO:0000271	polysaccharide biosynthetic process	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
CC	GO:0005575	cellular_component	None	Extended
BP	GO:0005975	carbohydrate metabolic process	None	Extended
BP	GO:0005976	polysaccharide metabolic process	None	Extended
BP	GO:0006073	cellular glucan metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0008194	UDP-glycosyltransferase activity	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009059	macromolecule biosynthetic process	None	Extended
BP	GO:0009250	glucan biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
CC	GO:0016020	membrane	IEA	Interproscan
BP	GO:0016051	carbohydrate biosynthetic process	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016757	glycosyltransferase activity	None	Extended
MF	GO:0016758	hexosyltransferase activity	None	Extended
MF	GO:0016759	cellulose synthase activity	None	Extended
MF	GO:0016760	cellulose synthase (UDP-forming) activity	IEA	Interproscan
BP	GO:0030243	cellulose metabolic process	None	Extended
BP	GO:0030244	cellulose biosynthetic process	IEA	Interproscan
BP	GO:0033692	cellular polysaccharide biosynthetic process	None	Extended
BP	GO:0034637	cellular carbohydrate biosynthetic process	None	Extended
BP	GO:0034645	cellular macromolecule biosynthetic process	None	Extended
MF	GO:0035251	UDP-glucosyltransferase activity	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044042	glucan metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0044262	cellular carbohydrate metabolic process	None	Extended
BP	GO:0044264	cellular polysaccharide metabolic process	None	Extended
MF	GO:0046527	glucosyltransferase activity	None	Extended
BP	GO:0051273	beta-glucan metabolic process	None	Extended
BP	GO:0051274	beta-glucan biosynthetic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
BP	GO:0006486	protein glycosylation	IEP	HCCA
BP	GO:0008037	cell recognition	IEP	HCCA
MF	GO:0008373	sialyltransferase activity	IEP	HCCA
MF	GO:0016765	transferase activity, transferring alkyl or aryl (other than methyl) groups	IEP	HCCA
BP	GO:0043413	macromolecule glycosylation	IEP	HCCA
BP	GO:0048544	recognition of pollen	IEP	HCCA
BP	GO:0070085	glycosylation	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR027934	CES_Znf_RING	28	104
IPR005150	Cellulose_synth	366	433

External Links

No external refs found!

Sam_g23906

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation