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  5. Sam_g23833

Sam_g23833


Description : actin-depolymerizing factor & original description: none


Gene families : OG0000202 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000202_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23833

Target Alias Description ECC score Gene Family Method Actions
AT4G25590 ADF7 actin depolymerizing factor 7 0.02 OrthoFinder output from all 47 species
AT5G52360 ADF10 actin depolymerizing factor 10 0.02 OrthoFinder output from all 47 species
Dcu_g29577 ADF6, ATADF6 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Gb_02796 ADF6, ATADF6 actin-depolymerizing factor 0.04 OrthoFinder output from all 47 species
Ppi_g11839 ADF3 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g22888 ATADF4, ADF4 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g23543 ADF8 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g42878 ADF7 actin-depolymerizing factor & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g22380 No alias actin-depolymerizing factor & original description: none 0.08 OrthoFinder output from all 47 species
Sam_g43203 No alias actin-depolymerizing factor & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g48039 No alias actin-depolymerizing factor & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003779 actin binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0005044 scavenger receptor activity IEP HCCA
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP HCCA
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0030246 carbohydrate binding IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
MF GO:0038024 cargo receptor activity IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
MF GO:0051287 NAD binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
BP GO:1902600 proton transmembrane transport IEP HCCA
InterPro domains Description Start Stop
IPR002108 ADF-H 13 133
No external refs found!