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  5. Sam_g23832

Sam_g23832


Description : small GTPase *(ROP) & original description: none


Gene families : OG0000503 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000503_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g23832

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00109p00095870 ARAC7, ROP9,... Multi-process regulation.Rop GTPase regulatory... 0.04 OrthoFinder output from all 47 species
AT1G75840 ATROP4, ROP4,... RAC-like GTP binding protein 5 0.03 OrthoFinder output from all 47 species
AT2G44690 ARAC9, ATROP8, ROP8 Arabidopsis RAC-like 9 0.02 OrthoFinder output from all 47 species
AT4G28950 ARAC7, ROP9,... RHO-related protein from plants 9 0.02 OrthoFinder output from all 47 species
Adi_g003765 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g053481 ARAC3, RAC3,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Adi_g081138 ATRAC11, ARAC11,... not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g23892 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g25534 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g01235 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Als_g06146 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g08767 ATRAC4, ARAC4,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Als_g32654 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Als_g48079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03079 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g03732 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene35809.t1 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene50526.t1 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Azfi_s0002.g001186 ATRAC11, ARAC11,... not classified & original description: CDS=1-612 0.04 OrthoFinder output from all 47 species
Azfi_s0032.g024979 ATRAC1, ROP3,... not classified & original description: CDS=801-1349 0.04 OrthoFinder output from all 47 species
Azfi_s0077.g037962 ARAC3, RAC3,... small GTPase *(ROP) & original description: CDS=292-831 0.02 OrthoFinder output from all 47 species
Cba_g14200 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g27597 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.36G016200.1 ARAC3, RAC3,... small GTPase *(ROP) & original description:... 0.04 OrthoFinder output from all 47 species
Dac_g03585 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g42232 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dcu_g07418 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g20297 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g51070 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
GSVIVT01007804001 ATRAC10, ARAC10,... Multi-process regulation.Rop GTPase regulatory... 0.03 OrthoFinder output from all 47 species
LOC_Os02g20850.1 ATRAC1, ROP3,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
LOC_Os05g43820.1 ARAC7, ROP9,... small GTPase (ROP) 0.04 OrthoFinder output from all 47 species
Len_g29378 ARAC3, RAC3,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g29379 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
MA_36432g0010 ARAC3, RAC3,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species
Msp_g11271 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g01865 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g13115 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g27441 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.04 OrthoFinder output from all 47 species
Pir_g01891 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g04924 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0010.g004935 ATROP4, ROP4,... small GTPase *(ROP) & original description: CDS=382-930 0.06 OrthoFinder output from all 47 species
Sacu_v1.1_s0031.g010640 ATRAC11, ARAC11,... not classified & original description: CDS=1-750 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0167.g024188 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: CDS=374-982 0.07 OrthoFinder output from all 47 species
Sam_g51141 No alias small GTPase *(ROP) & original description: none 0.06 OrthoFinder output from all 47 species
Solyc02g077400.4.1 ARAC2, RAC2,... small GTPase (ROP) 0.02 OrthoFinder output from all 47 species
Solyc07g020800.3.1 ARAC7, ROP9,... small GTPase (ROP) 0.06 OrthoFinder output from all 47 species
Tin_g03146 ATRAC11, ARAC11,... small GTPase *(ROP) & original description: none 0.03 OrthoFinder output from all 47 species
Zm00001e032127_P001 ARAC7, ROP9,... small GTPase (ROP) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEA Interproscan
MF GO:0005525 GTP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
MF GO:0005515 protein binding IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
InterPro domains Description Start Stop
IPR001806 Small_GTPase 83 253
No external refs found!