Sam_g23032

Description : not classified & original description: none

Gene families : OG0005491 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0005491_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Sam_g23032
Cluster	HCCA: Cluster_11

Target	Alias	Description	ECC score	Gene Family Method
AT3G02820	No alias	zinc knuckle (CCHC-type) family protein	0.04	OrthoFinder output from all 47 species
Aop_g13191	No alias	not classified & original description: none	0.1	OrthoFinder output from all 47 species
Aspi01Gene16431.t1	Aspi01Gene16431	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Ceric.05G035600.1	Ceric.05G035600	not classified & original description: pacid=50579047...	0.03	OrthoFinder output from all 47 species
Cpa\|evm.model.tig00020554.125	No alias	No description available	0.02	OrthoFinder output from all 47 species
Dcu_g05327	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Gb_29865	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
LOC_Os02g52460.1	LOC_Os02g52460	no hits & (original description: none)	0.03	OrthoFinder output from all 47 species
Len_g01663	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
MA_10427230g0010	No alias	no hits & (original description: none)	0.07	OrthoFinder output from all 47 species
Msp_g12673	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Nbi_g37011	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Solyc04g008600.4.1	Solyc04g008600	no hits & (original description: none)	0.04	OrthoFinder output from all 47 species
Spa_g08737	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Tin_g31118	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Zm00001e013348_P002	Zm00001e013348	no hits & (original description: none)	0.01	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005634	nucleus	IEA	Interproscan
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006275	regulation of DNA replication	None	Extended
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	IEA	Interproscan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008156	negative regulation of DNA replication	None	Extended
BP	GO:0009892	negative regulation of metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0010605	negative regulation of macromolecule metabolic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031324	negative regulation of cellular metabolic process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
CC	GO:0043226	organelle	None	Extended
CC	GO:0043227	membrane-bounded organelle	None	Extended
CC	GO:0043229	intracellular organelle	None	Extended
CC	GO:0043231	intracellular membrane-bounded organelle	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0045005	DNA-templated DNA replication maintenance of fidelity	None	Extended
BP	GO:0045934	negative regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0048478	replication fork protection	IEA	Interproscan
BP	GO:0048519	negative regulation of biological process	None	Extended
BP	GO:0048523	negative regulation of cellular process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051052	regulation of DNA metabolic process	None	Extended
BP	GO:0051053	negative regulation of DNA metabolic process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051172	negative regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:0090329	regulation of DNA-templated DNA replication	None	Extended
CC	GO:0110165	cellular anatomical entity	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended
BP	GO:2000104	negative regulation of DNA-templated DNA replication	None	Extended

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Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Start	Stop
IPR012923	Csm3	2	41

External Links

No external refs found!

Sam_g23032

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation