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  5. Sam_g22933

Sam_g22933


Description : not classified & original description: none


Gene families : OG0002896 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002896_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22933
Cluster HCCA: Cluster_12

Target Alias Description ECC score Gene Family Method Actions
Aop_g04895 THIC, PY hydroxymethylpyrimidine phosphate synthase *(ThiC) &... 0.04 OrthoFinder output from all 47 species
Len_g30576 THIC, PY hydroxymethylpyrimidine phosphate synthase *(ThiC) &... 0.02 OrthoFinder output from all 47 species
Pir_g08855 THIC, PY hydroxymethylpyrimidine phosphate synthase *(ThiC) &... 0.02 OrthoFinder output from all 47 species
Smo120890 THIC, PY Coenzyme metabolism.thiamine pyrophosphate... 0.02 OrthoFinder output from all 47 species
Smo152730 THIC, PY Coenzyme metabolism.thiamine pyrophosphate... 0.02 OrthoFinder output from all 47 species
Smo418436 THIC, PY Coenzyme metabolism.thiamine pyrophosphate... 0.03 OrthoFinder output from all 47 species
Zm00001e005154_P001 THIC, PY, Zm00001e005154 hydroxymethylpyrimidine phosphate synthase (ThiC) 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004180 carboxypeptidase activity IEP HCCA
MF GO:0004185 serine-type carboxypeptidase activity IEP HCCA
BP GO:0006066 alcohol metabolic process IEP HCCA
BP GO:0006766 vitamin metabolic process IEP HCCA
BP GO:0006767 water-soluble vitamin metabolic process IEP HCCA
BP GO:0006772 thiamine metabolic process IEP HCCA
BP GO:0006790 sulfur compound metabolic process IEP HCCA
MF GO:0008238 exopeptidase activity IEP HCCA
BP GO:0009110 vitamin biosynthetic process IEP HCCA
BP GO:0009228 thiamine biosynthetic process IEP HCCA
BP GO:0034308 primary alcohol metabolic process IEP HCCA
BP GO:0034309 primary alcohol biosynthetic process IEP HCCA
BP GO:0042364 water-soluble vitamin biosynthetic process IEP HCCA
BP GO:0042723 thiamine-containing compound metabolic process IEP HCCA
BP GO:0042724 thiamine-containing compound biosynthetic process IEP HCCA
BP GO:0044272 sulfur compound biosynthetic process IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA
BP GO:0046165 alcohol biosynthetic process IEP HCCA
MF GO:0051536 iron-sulfur cluster binding IEP HCCA
MF GO:0051540 metal cluster binding IEP HCCA
MF GO:0070008 serine-type exopeptidase activity IEP HCCA
BP GO:0072527 pyrimidine-containing compound metabolic process IEP HCCA
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP HCCA
BP GO:1901615 organic hydroxy compound metabolic process IEP HCCA
BP GO:1901617 organic hydroxy compound biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!