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  5. Sam_g22511

Sam_g22511


Description : not classified & original description: none


Gene families : OG0002832 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002832_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22511

Target Alias Description ECC score Gene Family Method Actions
Aob_g12229 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene09986.t1 ATPUB45, PUB45,... E3 ubiquitin ligase & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g38211 No alias E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species
LOC_Os01g67500.1 ATPUB45, PUB45,... U-box domain-containing protein 45 OS=Arabidopsis... 0.03 OrthoFinder output from all 47 species
Ore_g12775 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g30490 ATPUB45, PUB45 E3 ubiquitin ligase & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003849 3-deoxy-7-phosphoheptulonate synthase activity IEP HCCA
BP GO:0006520 amino acid metabolic process IEP HCCA
BP GO:0009072 aromatic amino acid metabolic process IEP HCCA
BP GO:0009073 aromatic amino acid family biosynthetic process IEP HCCA
BP GO:0016053 organic acid biosynthetic process IEP HCCA
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP HCCA
BP GO:0044283 small molecule biosynthetic process IEP HCCA

No InterPro domains available for this sequence

No external refs found!