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  5. Sam_g22162

Sam_g22162


Description : not classified & original description: none


Gene families : OG0000103 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000103_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g22162

Target Alias Description ECC score Gene Family Method Actions
Ala_g32552 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dac_g00666 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g19554 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Dde_g38107 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g42068 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pp3c2_29380V3.1 Pp3c2_29380 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Pp3c2_29540V3.1 Pp3c2_29540 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Pp3c6_22490V3.1 Pp3c6_22490 Disease resistance protein (TIR-NBS-LRR class) family 0.01 OrthoFinder output from all 47 species
Sacu_v1.1_s0180.g024798 No alias not classified & original description: CDS=1-1488 0.02 OrthoFinder output from all 47 species
Sam_g22093 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g24125 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g24837 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g39055 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0007165 signal transduction IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP HCCA
MF GO:0005543 phospholipid binding IEP HCCA
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP HCCA
BP GO:0006887 exocytosis IEP HCCA
MF GO:0008289 lipid binding IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
MF GO:0016757 glycosyltransferase activity IEP HCCA
BP GO:0032940 secretion by cell IEP HCCA
MF GO:0035091 phosphatidylinositol binding IEP HCCA
MF GO:0043168 anion binding IEP HCCA
BP GO:0046903 secretion IEP HCCA
MF GO:0046983 protein dimerization activity IEP HCCA
CC GO:0099023 vesicle tethering complex IEP HCCA
BP GO:0140352 export from cell IEP HCCA
MF GO:1901981 phosphatidylinositol phosphate binding IEP HCCA
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP HCCA
InterPro domains Description Start Stop
IPR000157 TIR_dom 15 97
No external refs found!