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  5. Sam_g21998

Sam_g21998


Description : not classified & original description: none


Gene families : OG0000334 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000334_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g21998

Target Alias Description ECC score Gene Family Method Actions
Als_g11252 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Aop_g09879 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.02 OrthoFinder output from all 47 species
Aspi01Gene29929.t1 YSL6, Aspi01Gene29929 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.20G086500.1 YSL6, Ceric.20G086500 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Msp_g09197 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.04 OrthoFinder output from all 47 species
Ppi_g15427 YSL6 ferric cation-chelator transporter *(YSL) & original... 0.03 OrthoFinder output from all 47 species
Sam_g16874 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0035673 oligopeptide transmembrane transporter activity IEA Interproscan
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Type GO Term Name Evidence Source
CC GO:0005856 cytoskeleton IEP HCCA
CC GO:0005885 Arp2/3 protein complex IEP HCCA
BP GO:0006897 endocytosis IEP HCCA
BP GO:0007015 actin filament organization IEP HCCA
CC GO:0015629 actin cytoskeleton IEP HCCA
BP GO:0016043 cellular component organization IEP HCCA
BP GO:0016192 vesicle-mediated transport IEP HCCA
BP GO:0034314 Arp2/3 complex-mediated actin nucleation IEP HCCA
BP GO:0045010 actin nucleation IEP HCCA
BP GO:0071840 cellular component organization or biogenesis IEP HCCA
BP GO:0097435 supramolecular fiber organization IEP HCCA
InterPro domains Description Start Stop
IPR004813 OPT 1 132
No external refs found!