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  5. Sam_g21469

Sam_g21469


Description : not classified & original description: none


Gene families : OG0000647 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000647_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g21469
Cluster HCCA: Cluster_58

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00007p00217240 evm_27.TU.AmTr_v1... Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Als_g04390 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g07906 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Aob_g30472 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Aspi01Gene28924.t1 Aspi01Gene28924 regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Ceric.22G033000.1 Ceric.22G033000 regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Ceric.31G062700.1 Ceric.31G062700 regulatory protein *(GIL1) of phytochrome-mediated... 0.04 OrthoFinder output from all 47 species
Dde_g09217 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10017 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g10148 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Dde_g49716 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01021261001 UNE1 Protein GRAVITROPIC IN THE LIGHT 1 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Lfl_g05673 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g06041 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.03 OrthoFinder output from all 47 species
Pir_g16215 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g14822 No alias regulatory protein *(GIL1) of phytochrome-mediated... 0.02 OrthoFinder output from all 47 species
Ppi_g31374 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g50025 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g47994 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Tin_g46128 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006644 phospholipid metabolic process IEP HCCA
BP GO:0006650 glycerophospholipid metabolic process IEP HCCA
BP GO:0006810 transport IEP HCCA
MF GO:0010277 chlorophyllide a oxygenase [overall] activity IEP HCCA
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP HCCA
MF GO:0016491 oxidoreductase activity IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016703 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of one atom of oxygen (internal monooxygenases or internal mixed function oxidases) IEP HCCA
BP GO:0044255 cellular lipid metabolic process IEP HCCA
MF GO:0046422 violaxanthin de-epoxidase activity IEP HCCA
BP GO:0046486 glycerolipid metabolic process IEP HCCA
BP GO:0046488 phosphatidylinositol metabolic process IEP HCCA
BP GO:0051179 localization IEP HCCA
BP GO:0051234 establishment of localization IEP HCCA
InterPro domains Description Start Stop
IPR006943 DUF641_pln 145 287
No external refs found!