Sam_g21246


Description : not classified & original description: none


Gene families : OG0000111 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000111_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g21246

Target Alias Description ECC score Gene Family Method Actions
ATMG00750 ORF119 GAG/POL/ENV polyprotein 0.04 OrthoFinder output from all 47 species
Adi_g007703 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g013625 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g023101 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g046828 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g046829 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g055350 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g117321 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g03494 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g09545 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g14147 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g24695 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g32067 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aev_g39882 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aev_g43475 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aev_g43520 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g48454 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g49064 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Ala_g25990 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Aob_g08954 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aop_g05848 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene09997.t1 Aspi01Gene09997 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene18909.t1 Aspi01Gene18909 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene20130.t1 Aspi01Gene20130 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene31059.t1 Aspi01Gene31059 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aspi01Gene36439.t1 Aspi01Gene36439 not classified & original description: none 0.05 OrthoFinder output from all 47 species
Aspi01Gene50307.t1 Aspi01Gene50307 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene51417.t1 Aspi01Gene51417 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene64746.t1 Aspi01Gene64746 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g02848 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Cba_g03408 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g08727 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g15184 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g18631 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g21255 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g26540 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Cba_g62682 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g72774 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g00029 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g09070 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Msp_g17028 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g30210 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Msp_g32237 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Msp_g32801 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g26148 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Nbi_g29971 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Nbi_g43442 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Ore_g21059 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g09355 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Pir_g18805 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g50091 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Pir_g59010 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g09382 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g00993 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g01326 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g02382 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g09192 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g19328 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g21437 No alias not classified & original description: none 0.1 OrthoFinder output from all 47 species
Sam_g23238 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g23696 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g24602 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g25599 No alias not classified & original description: none 0.07 OrthoFinder output from all 47 species
Sam_g27010 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sam_g27690 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g28735 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g30488 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g37056 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sam_g37627 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40209 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Sam_g40458 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Sam_g49068 No alias not classified & original description: none 0.06 OrthoFinder output from all 47 species
Tin_g03357 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
Tin_g15361 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Tin_g25705 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
BP GO:0015074 DNA integration IEA Interproscan
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence

InterPro domains Description Start Stop
IPR041588 Integrase_H2C2 59 115
IPR001584 Integrase_cat-core 129 227
No external refs found!