Lfl_g27465

Description : not classified & original description: none

Gene families : OG0006792 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0006792_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	HRR: Lfl_g27465

Target	Alias	Description	ECC score	Gene Family Method
AMTR_s00002p00233660	evm_27.TU.AmTr_v1...	GTP-binding protein At3g49725, chloroplastic...	0.05	OrthoFinder output from all 47 species
AT5G57960	No alias	GTP-binding protein, HflX	0.06	OrthoFinder output from all 47 species
Adi_g059600	No alias	not classified & original description: none	0.03	OrthoFinder output from all 47 species
Aob_g20881	No alias	not classified & original description: none	0.06	OrthoFinder output from all 47 species
Aop_g16169	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Azfi_s0130.g049064	No alias	not classified & original description: CDS=55-2229	0.04	OrthoFinder output from all 47 species
Cba_g10418	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Ceric.34G037600.1	Ceric.34G037600	not classified & original description: pacid=50623913...	0.04	OrthoFinder output from all 47 species
GSVIVT01009778001	No alias	GTP-binding protein At3g49725, chloroplastic...	0.02	OrthoFinder output from all 47 species
Gb_27515	No alias	component MED19 of head module of MEDIATOR transcription...	0.03	OrthoFinder output from all 47 species
LOC_Os11g38020.1	LOC_Os11g38020	GTP-binding protein At3g49725, chloroplastic...	0.03	OrthoFinder output from all 47 species
MA_10437248g0010	No alias	no hits & (original description: none)	0.02	OrthoFinder output from all 47 species
Msp_g06486	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species
Nbi_g31437	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Ore_g19828	No alias	not classified & original description: none	0.04	OrthoFinder output from all 47 species
Pir_g48993	No alias	not classified & original description: none	0.05	OrthoFinder output from all 47 species
Spa_g07834	No alias	not classified & original description: none	0.07	OrthoFinder output from all 47 species

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	Interproscan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0004386	helicase activity	IEP	HCCA
MF	GO:0016854	racemase and epimerase activity	IEP	HCCA
MF	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives	IEP	HCCA

InterPro domains	Description	Start	Stop
IPR006073	GTP-bd	388	506
IPR045498	HflX_C	524	594
IPR025121	GTPase_HflX_N	212	300
IPR032305	GTP-bd_M	303	380

External Links

No external refs found!

Lfl_g27465

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation