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  5. Sam_g20804

Sam_g20804


Description : H-type thioredoxin *(Trx-H) & original description: none


Gene families : OG0000082 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000082_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20804

Target Alias Description ECC score Gene Family Method Actions
AMTR_s00002p00259770 TRXH2, TRX2,... Redox homeostasis.cytosol/mitochondrion/nucleus redox... 0.02 OrthoFinder output from all 47 species
Azfi_s1768.g106718 ATHIP2, TDX, HIP, ATTDX not classified & original description: CDS=23-376 0.03 OrthoFinder output from all 47 species
MA_7674884g0010 ATCXXS1, CXXS1 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Msp_g02161 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Ore_g10130 ATH9, TH9, TRX H9 protein-S-nitrosothiol reductase *(TRX5) & original... 0.03 OrthoFinder output from all 47 species
Sam_g30231 No alias H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species
Solyc03g095500.3.1 ATH9, TH9, TRX... H-type thioredoxin 0.02 OrthoFinder output from all 47 species
Spa_g31065 ATH9, TH9, TRX H9 H-type thioredoxin *(Trx-H) & original description: none 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006304 DNA modification IEP HCCA
BP GO:0006305 DNA alkylation IEP HCCA
BP GO:0006306 DNA methylation IEP HCCA
BP GO:0006950 response to stress IEP HCCA
BP GO:0006952 defense response IEP HCCA
MF GO:0008170 N-methyltransferase activity IEP HCCA
CC GO:0016020 membrane IEP HCCA
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030976 thiamine pyrophosphate binding IEP HCCA
BP GO:0032259 methylation IEP HCCA
BP GO:0043414 macromolecule methylation IEP HCCA
BP GO:0044728 DNA methylation or demethylation IEP HCCA
BP GO:0050896 response to stimulus IEP HCCA
MF GO:0050997 quaternary ammonium group binding IEP HCCA
MF GO:1901681 sulfur compound binding IEP HCCA
InterPro domains Description Start Stop
IPR013766 Thioredoxin_domain 16 109
No external refs found!