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  5. Lfl_g27390

Lfl_g27390


Description : not classified & original description: none


Gene families : OG0000596 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000596_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Lfl_g27390

Target Alias Description ECC score Gene Family Method Actions
Adi_g015683 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aev_g18948 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g48359 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g38904 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Dcu_g34345 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01018126001 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.03 OrthoFinder output from all 47 species
GSVIVT01036253001 No alias Pentatricopeptide repeat-containing protein At1g12620... 0.03 OrthoFinder output from all 47 species
Len_g39133 No alias not classified & original description: none 0.05 OrthoFinder output from all 47 species
MA_10286643g0010 No alias Pentatricopeptide repeat-containing protein At3g22470,... 0.03 OrthoFinder output from all 47 species
MA_33956g0010 No alias Pentatricopeptide repeat-containing protein At3g53700,... 0.02 OrthoFinder output from all 47 species
MA_7256709g0010 No alias Pentatricopeptide repeat-containing protein At1g05670,... 0.03 OrthoFinder output from all 47 species
Msp_g04828 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g25561 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ore_g30153 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g37824 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Smo52385 No alias Pentatricopeptide repeat-containing protein At1g62910... 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003690 double-stranded DNA binding IEP HCCA
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 291 322
IPR002885 Pentatricopeptide_repeat 224 272
IPR002885 Pentatricopeptide_repeat 84 132
IPR002885 Pentatricopeptide_repeat 329 376
IPR002885 Pentatricopeptide_repeat 14 62
IPR002885 Pentatricopeptide_repeat 154 202
No external refs found!