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  5. Sam_g20179

Sam_g20179


Description : component *(eL30) of large ribosomal-subunit (LSU) proteome & original description: none


Gene families : OG0000968 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000968_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20179

Target Alias Description ECC score Gene Family Method Actions
AT3G18740 No alias Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.02 OrthoFinder output from all 47 species
Adi_g088387 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Adi_g127039 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.04 OrthoFinder output from all 47 species
Ala_g33421 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Aop_g17201 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Aop_g69765 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.02 OrthoFinder output from all 47 species
Azfi_s0024.g020342 No alias component *(eL30) of large ribosomal-subunit (LSU)... 0.03 OrthoFinder output from all 47 species
Cre10.g420750 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.02 OrthoFinder output from all 47 species
GSVIVT01022191001 No alias Protein biosynthesis.cytosolic ribosome.large subunit... 0.03 OrthoFinder output from all 47 species
Gb_02409 No alias component RPL30 of LSU proteome component 0.02 OrthoFinder output from all 47 species
LOC_Os01g16890.1 LOC_Os01g16890 component RPL30 of LSU proteome component 0.02 OrthoFinder output from all 47 species
Pp3c12_9290V3.1 Pp3c12_9290 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.01 OrthoFinder output from all 47 species
Pp3c16_10400V3.1 Pp3c16_10400 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.03 OrthoFinder output from all 47 species
Pp3c25_9320V3.1 Pp3c25_9320 Ribosomal protein L7Ae/L30e/S12e/Gadd45 family protein 0.01 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003735 structural constituent of ribosome IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0005198 structural molecule activity IEP HCCA
CC GO:0005575 cellular_component IEP HCCA
CC GO:0005576 extracellular region IEP HCCA
CC GO:0005840 ribosome IEP HCCA
BP GO:0006412 translation IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
BP GO:0006518 peptide metabolic process IEP HCCA
MF GO:0008061 chitin binding IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
BP GO:0008152 metabolic process IEP HCCA
BP GO:0009059 macromolecule biosynthetic process IEP HCCA
CC GO:0009521 photosystem IEP HCCA
CC GO:0009522 photosystem I IEP HCCA
CC GO:0009538 photosystem I reaction center IEP HCCA
BP GO:0009987 cellular process IEP HCCA
BP GO:0015979 photosynthesis IEP HCCA
BP GO:0034645 cellular macromolecule biosynthetic process IEP HCCA
BP GO:0043043 peptide biosynthetic process IEP HCCA
CC GO:0043226 organelle IEP HCCA
CC GO:0043228 non-membrane-bounded organelle IEP HCCA
CC GO:0043229 intracellular organelle IEP HCCA
CC GO:0043232 intracellular non-membrane-bounded organelle IEP HCCA
BP GO:0043603 amide metabolic process IEP HCCA
BP GO:0043604 amide biosynthetic process IEP HCCA
BP GO:0044237 cellular metabolic process IEP HCCA
BP GO:0044260 cellular macromolecule metabolic process IEP HCCA
BP GO:0044271 cellular nitrogen compound biosynthetic process IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0110165 cellular anatomical entity IEP HCCA
BP GO:1901566 organonitrogen compound biosynthetic process IEP HCCA
InterPro domains Description Start Stop
IPR004038 Ribosomal_L7Ae/L30e/S12e/Gad45 12 104
No external refs found!