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  5. Sam_g20131

Sam_g20131


Description : not classified & original description: none


Gene families : OG0002037 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002037_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20131

Target Alias Description ECC score Gene Family Method Actions
Adi_g021816 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Adi_g021817 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Adi_g021818 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Aev_g18030 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ala_g20051 OTP82 not classified & original description: none 0.04 OrthoFinder output from all 47 species
Als_g11832 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Als_g22361 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g12840 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Aop_g13136 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g17555 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Azfi_s0185.g056663 No alias not classified & original description: CDS=1-1308 0.03 OrthoFinder output from all 47 species
Azfi_s0760.g085614 OTP82 not classified & original description: CDS=119-1039 0.08 OrthoFinder output from all 47 species
Ceric.16G082900.1 OTP82, Ceric.16G082900 not classified & original description: pacid=50589499... 0.12 OrthoFinder output from all 47 species
Dac_g12257 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g17663 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Dde_g26527 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
GSVIVT01020757001 No alias Pentatricopeptide repeat-containing protein At2g41080... 0.01 OrthoFinder output from all 47 species
Len_g16899 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g01202 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Msp_g08645 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Nbi_g00597 No alias not classified & original description: none 0.04 OrthoFinder output from all 47 species
Ore_g41880 OTP84 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Ppi_g00847 OTP82 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0057.g014719 OTP82 not classified & original description: CDS=89-988 0.09 OrthoFinder output from all 47 species
Sam_g17797 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g04188 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Spa_g10997 OTP82 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Tin_g04428 OTP82 not classified & original description: none 0.05 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0008270 zinc ion binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP HCCA
MF GO:0003723 RNA binding IEP HCCA
CC GO:0016272 prefoldin complex IEP HCCA
MF GO:0051082 unfolded protein binding IEP HCCA
InterPro domains Description Start Stop
IPR032867 DYW_dom 209 301
No external refs found!