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  5. Sam_g20101

Sam_g20101


Description : actin filament protein & original description: none


Gene families : OG0000179 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000179_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g20101

Target Alias Description ECC score Gene Family Method Actions
AT1G49240 ACT8 actin 8 0.02 OrthoFinder output from all 47 species
AT3G18780 DER1, LSR2, ACT2, ENL2 actin 2 0.02 OrthoFinder output from all 47 species
Als_g10476 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aob_g02950 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g03467 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g06911 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g22713 AAc1, ACT1 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g31641 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g37063 ACT7 not classified & original description: none 0.03 OrthoFinder output from all 47 species
Cba_g68282 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.08G028400.1 ACT7, Ceric.08G028400 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Ceric.22G030400.1 ACT7, Ceric.22G030400 actin filament protein & original description:... 0.03 OrthoFinder output from all 47 species
Lfl_g06946 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species
Lfl_g18759 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Lfl_g22569 ACT7 actin filament protein & original description: none 0.02 OrthoFinder output from all 47 species
MA_6786906g0010 ACT7 Actin OS=Gossypium hirsutum (sp|o81221|act_goshi : 327.0) 0.02 OrthoFinder output from all 47 species
MA_96086g0010 ACT7 actin filament protein 0.02 OrthoFinder output from all 47 species
Nbi_g07984 ACT7 actin filament protein & original description: none 0.03 OrthoFinder output from all 47 species
Ppi_g45610 No alias not classified & original description: none 0.02 OrthoFinder output from all 47 species
Spa_g51498 ACT7 actin filament protein & original description: none 0.04 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004386 helicase activity IEP HCCA
MF GO:0004672 protein kinase activity IEP HCCA
BP GO:0005975 carbohydrate metabolic process IEP HCCA
BP GO:0005984 disaccharide metabolic process IEP HCCA
BP GO:0005991 trehalose metabolic process IEP HCCA
BP GO:0005992 trehalose biosynthetic process IEP HCCA
BP GO:0006468 protein phosphorylation IEP HCCA
BP GO:0006793 phosphorus metabolic process IEP HCCA
BP GO:0006796 phosphate-containing compound metabolic process IEP HCCA
BP GO:0009311 oligosaccharide metabolic process IEP HCCA
BP GO:0009312 oligosaccharide biosynthetic process IEP HCCA
BP GO:0016051 carbohydrate biosynthetic process IEP HCCA
MF GO:0016301 kinase activity IEP HCCA
BP GO:0016310 phosphorylation IEP HCCA
MF GO:0016701 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen IEP HCCA
MF GO:0016702 oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen IEP HCCA
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP HCCA
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP HCCA
BP GO:0034637 cellular carbohydrate biosynthetic process IEP HCCA
BP GO:0036211 protein modification process IEP HCCA
BP GO:0043412 macromolecule modification IEP HCCA
BP GO:0044238 primary metabolic process IEP HCCA
BP GO:0044262 cellular carbohydrate metabolic process IEP HCCA
BP GO:0046351 disaccharide biosynthetic process IEP HCCA
MF GO:0051213 dioxygenase activity IEP HCCA
BP GO:0071704 organic substance metabolic process IEP HCCA
InterPro domains Description Start Stop
IPR004000 Actin 5 377
No external refs found!