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  5. Sam_g19986

Sam_g19986


Description : not classified & original description: none


Gene families : OG0002295 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002295_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19986

Target Alias Description ECC score Gene Family Method Actions
Aev_g26688 AtRLP4, RLP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Aop_g09847 No alias not classified & original description: none 0.03 OrthoFinder output from all 47 species
Ceric.11G053300.1 AtRLP4, RLP4,... not classified & original description: pacid=50596445... 0.02 OrthoFinder output from all 47 species
LOC_Os01g04720.1 LOC_Os01g04720 Receptor-like protein 4 OS=Arabidopsis thaliana... 0.02 OrthoFinder output from all 47 species
Nbi_g03707 AtRLP4, RLP4 not classified & original description: none 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0008.g004220 No alias not classified & original description: CDS=1-1839 0.03 OrthoFinder output from all 47 species
Sacu_v1.1_s0205.g025734 AtRLP4, RLP4 not classified & original description: CDS=175-1683 0.03 OrthoFinder output from all 47 species
Smo133089 No alias Receptor-like protein 4 OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0003774 cytoskeletal motor activity IEP HCCA
MF GO:0003777 microtubule motor activity IEP HCCA
BP GO:0006351 DNA-templated transcription IEP HCCA
BP GO:0007017 microtubule-based process IEP HCCA
BP GO:0007018 microtubule-based movement IEP HCCA
MF GO:0008017 microtubule binding IEP HCCA
MF GO:0008094 ATP-dependent activity, acting on DNA IEP HCCA
MF GO:0015631 tubulin binding IEP HCCA
CC GO:0015934 large ribosomal subunit IEP HCCA
CC GO:0044391 ribosomal subunit IEP HCCA
BP GO:0097659 nucleic acid-templated transcription IEP HCCA
MF GO:0140097 catalytic activity, acting on DNA IEP HCCA
MF GO:0140657 ATP-dependent activity IEP HCCA
MF GO:0140658 ATP-dependent chromatin remodeler activity IEP HCCA
CC GO:1990904 ribonucleoprotein complex IEP HCCA
InterPro domains Description Start Stop
IPR001611 Leu-rich_rpt 446 505
IPR024788 Malectin-like_Carb-bd_dom 37 365
No external refs found!