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Sam_g19979


Description : sRNA cargo-loading helicase *(RH11/37) of extracellular vesicle trafficking & original description: none


Gene families : OG0002081 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002081_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19979

Target Alias Description ECC score Gene Family Method Actions
Ceric.08G007800.1 Ceric.08G007800 sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 OrthoFinder output from all 47 species
Dac_g21338 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.03 OrthoFinder output from all 47 species
Dcu_g19139 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.02 OrthoFinder output from all 47 species
GSVIVT01001348001 No alias DEAD-box ATP-dependent RNA helicase 37 OS=Arabidopsis thaliana 0.04 OrthoFinder output from all 47 species
Gb_15078 No alias DEAD-box ATP-dependent RNA helicase 52C OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
LOC_Os07g10250.1 LOC_Os07g10250 DEAD-box ATP-dependent RNA helicase 52B OS=Oryza sativa... 0.02 OrthoFinder output from all 47 species
Ore_g30360 No alias sRNA cargo-loading helicase *(RH11/37) of extracellular... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA Interproscan
MF GO:0005524 ATP binding IEA Interproscan
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Type GO Term Name Evidence Source
MF GO:0019842 vitamin binding IEP HCCA
MF GO:0030170 pyridoxal phosphate binding IEP HCCA
MF GO:0070279 vitamin B6 binding IEP HCCA
InterPro domains Description Start Stop
IPR001650 Helicase_C 427 519
IPR011545 DEAD/DEAH_box_helicase_dom 184 366
No external refs found!