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Sam_g19764


Description : component *(S2Lb/SWD2) of COMPASS histone trimethylation complex & original description: none


Gene families : OG0002761 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0002761_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19764

Target Alias Description ECC score Gene Family Method Actions
Ala_g05621 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Ceric.16G020200.1 Ceric.16G020200 component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Dac_g01475 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.03 OrthoFinder output from all 47 species
Dcu_g13988 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Len_g01709 No alias component *(S2Lb/SWD2) of COMPASS histone trimethylation... 0.02 OrthoFinder output from all 47 species
Sacu_v1.1_s0034.g011307 No alias not classified & original description: CDS=188-952 0.03 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0000413 protein peptidyl-prolyl isomerization IEP HCCA
MF GO:0003743 translation initiation factor activity IEP HCCA
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP HCCA
CC GO:0005634 nucleus IEP HCCA
CC GO:0005643 nuclear pore IEP HCCA
BP GO:0006413 translational initiation IEP HCCA
MF GO:0008135 translation factor activity, RNA binding IEP HCCA
MF GO:0008641 ubiquitin-like modifier activating enzyme activity IEP HCCA
MF GO:0016859 cis-trans isomerase activity IEP HCCA
MF GO:0016874 ligase activity IEP HCCA
MF GO:0016877 ligase activity, forming carbon-sulfur bonds IEP HCCA
BP GO:0018193 peptidyl-amino acid modification IEP HCCA
BP GO:0018208 peptidyl-proline modification IEP HCCA
MF GO:0019781 NEDD8 activating enzyme activity IEP HCCA
BP GO:0032446 protein modification by small protein conjugation IEP HCCA
BP GO:0045116 protein neddylation IEP HCCA
MF GO:0045182 translation regulator activity IEP HCCA
BP GO:0070647 protein modification by small protein conjugation or removal IEP HCCA
MF GO:0090079 translation regulator activity, nucleic acid binding IEP HCCA
CC GO:0140513 nuclear protein-containing complex IEP HCCA
InterPro domains Description Start Stop
IPR024977 Apc4_WD40_dom 209 252
IPR001680 WD40_repeat 117 152
IPR001680 WD40_repeat 37 65
IPR001680 WD40_repeat 262 283
No external refs found!