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Sam_g19708


Description : RNA splicing factor *(SR30/34) & original description: none


Gene families : OG0001059 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0001059_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19708
Cluster HCCA: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
Ala_g04919 SR30, ATSRP30, At-SR30 RNA splicing factor *(SR30/34) & original description: none 0.03 OrthoFinder output from all 47 species
Ala_g13919 SR30, ATSRP30, At-SR30 RNA splicing factor *(SR30/34) & original description: none 0.03 OrthoFinder output from all 47 species
Aob_g12937 SR30, ATSRP30, At-SR30 RNA splicing factor *(SR30/34) & original description: none 0.02 OrthoFinder output from all 47 species
Aspi01Gene14063.t1 SR34b, At-SR34b,... RNA splicing factor *(SR30/34) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene15245.t1 SR30, ATSRP30,... RNA splicing factor *(SR30/34) & original description: none 0.03 OrthoFinder output from all 47 species
Aspi01Gene22439.t1 SR30, ATSRP30,... RNA splicing factor *(SR30/34) & original description: none 0.02 OrthoFinder output from all 47 species
Cba_g59386 SR30, ATSRP30, At-SR30 RNA splicing factor *(SR30/34) & original description: none 0.03 OrthoFinder output from all 47 species
Dac_g38127 At-SR34a, SR34a, SRp34a RNA splicing factor *(SR30/34) & original description: none 0.02 OrthoFinder output from all 47 species
Len_g05322 SR30, ATSRP30, At-SR30 RNA splicing factor *(SR30/34) & original description: none 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source
MF GO:0003723 RNA binding IEA Interproscan
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Type GO Term Name Evidence Source
BP GO:0006259 DNA metabolic process IEP HCCA
BP GO:0015074 DNA integration IEP HCCA
InterPro domains Description Start Stop
IPR000504 RRM_dom 9 75
IPR000504 RRM_dom 110 174
No external refs found!