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  5. Sam_g19598

Sam_g19598


Description : adapter component *(SEU/SLK) of transcriptional co-repressor complex & original description: none


Gene families : OG0000747 (OrthoFinder output from all 47 species) Phylogenetic Tree(s): OG0000747_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood HRR: Sam_g19598

Target Alias Description ECC score Gene Family Method Actions
AT4G25515 SLK3 SEUSS-like 3 0.02 OrthoFinder output from all 47 species
Adi_g016540 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Adi_g086246 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Adi_g086260 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Adi_g117115 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aev_g01542 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Aspi01Gene51629.t1 SEU, Aspi01Gene51629 adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Gb_04695 SLK2 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Gb_27183 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Lfl_g05019 SEU adapter component *(SEU/SLK) of transcriptional... 0.04 OrthoFinder output from all 47 species
Lfl_g06246 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
MA_208023g0010 SLK2 no hits & (original description: none) 0.03 OrthoFinder output from all 47 species
Mp8g17020.1 SEU Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Msp_g47122 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ore_g05688 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Ore_g42762 SEU adapter component *(SEU/SLK) of transcriptional... 0.01 OrthoFinder output from all 47 species
Ppi_g14229 SEU adapter component *(SEU/SLK) of transcriptional... 0.02 OrthoFinder output from all 47 species
Smo409769 SEU Transcriptional corepressor SEUSS OS=Arabidopsis thaliana 0.02 OrthoFinder output from all 47 species
Solyc06g059750.3.1 SEU, Solyc06g059750 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Solyc06g059760.3.1 SEU, Solyc06g059760 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Tin_g08157 SEU adapter component *(SEU/SLK) of transcriptional... 0.03 OrthoFinder output from all 47 species
Zm00001e018384_P001 SEU, Zm00001e018384 Transcriptional corepressor SEUSS OS=Arabidopsis... 0.04 OrthoFinder output from all 47 species
Zm00001e029868_P001 SLK2, Zm00001e029868 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species
Zm00001e036645_P004 SLK2, Zm00001e036645 Probable transcriptional regulator SLK2 OS=Arabidopsis... 0.02 OrthoFinder output from all 47 species

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEP HCCA
MF GO:0004721 phosphoprotein phosphatase activity IEP HCCA
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP HCCA
BP GO:0016311 dephosphorylation IEP HCCA
MF GO:0016740 transferase activity IEP HCCA
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP HCCA
MF GO:0016791 phosphatase activity IEP HCCA
MF GO:0042578 phosphoric ester hydrolase activity IEP HCCA
MF GO:0042626 ATPase-coupled transmembrane transporter activity IEP HCCA
MF GO:0140359 ABC-type transporter activity IEP HCCA
InterPro domains Description Start Stop
IPR029005 LIM-bd/SEUSS 314 572
No external refs found!